François Aguet (Francois Aguet)

ORCID

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 37

Top Venues

Science (New York, N.Y.)

Nature communications

Nature genetics

medRxiv : the preprint server for health sciences

Broad Institute

École Polytechnique Fédérale de Lausanne (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Broad Institute Sep 29 2014

United States

Computational Biologist :: Cancer Program

Harvard Medical School

United States

Postdoctoral Fellow :: Cell Biology

Education History

École Polytechnique Fédérale de Lausanne

Switzerland

PHD :: Computer Science

École Polytechnique Fédérale de Lausanne

Switzerland

MSC :: Computer Science

Publications

Vijay S Ganesh, Kevin Riquin, Nicolas Chatron, Kay-Marie Lamar, Miriam C Aziz, Pauline Monin, Melanie O'Leary, Julia K Goodrich, Kiran V Garimella, Eleina England, Esther S Yoon, Ben Weisburd, François Aguet, Carlos A Bacino, David R Murdock, Hongzheng Dai, Jill Anne Rosenfeld, Lisa T Emrick, Shamika Ketkar, null null, Yael Sarusi, Damien Sanlaville, Saima Kayani, Brian Broadbent, Bertrand Isidor, Alisée Pengam, Benjamin Cogné, Daniel G MacArthur, Igor Ulitsky, Gemma Louise Carvill, Anne H O'Donnell-Luria
Novel syndromic neurodevelopmental disorder caused by de novo deletion of CHASERR , a long noncoding RNA. medRxiv : the preprint server for health sciences (2024)
Vijay S Ganesh, Kevin Riquin, Nicolas Chatron, Kay-Marie Lamar, Miriam C Aziz, Pauline Monin, Melanie O'Leary, Julia K Goodrich, Kiran V Garimella, Eleina England, Esther S Yoon, Ben Weisburd, François Aguet, Carlos A Bacino, David R Murdock, Hongzheng Dai, Jill Anne Rosenfeld, Lisa T Emrick, Shamika Ketkar, null null, Yael Sarusi, Damien Sanlaville, Saima Kayani, Brian Broadbent, Bertrand Isidor, Alisée Pengam, Benjamin Cogné, Daniel G MacArthur, Igor Ulitsky, Gemma Louise Carvill, Anne H O'Donnell-Luria
Novel syndromic neurodevelopmental disorder caused by de novo deletion of CHASERR , a long noncoding RNA. medRxiv : the preprint server for health sciences (2024)
Vijay S Ganesh, Kevin Riquin, Nicolas Chatron, Kay-Marie Lamar, Miriam C Aziz, Pauline Monin, Melanie O'Leary, Julia K Goodrich, Kiran V Garimella, Eleina England, Esther S Yoon, Ben Weisburd, François Aguet, Carlos A Bacino, David R Murdock, Hongzheng Dai, Jill Anne Rosenfeld, Lisa T Emrick, Shamika Ketkar, null null, Yael Sarusi, Damien Sanlaville, Saima Kayani, Brian Broadbent, Bertrand Isidor, Alisée Pengam, Benjamin Cogné, Daniel G MacArthur, Igor Ulitsky, Gemma Louise Carvill, Anne H O'Donnell-Luria
Novel syndromic neurodevelopmental disorder caused by de novo deletion of CHASERR , a long noncoding RNA. medRxiv : the preprint server for health sciences (2024)
Silva Kasela, François Aguet, Sarah Kim-Hellmuth, Brielin C Brown, Daniel C Nachun, Russell P Tracy, Peter Durda, Yongmei Liu, Kent D Taylor, W Craig Johnson, David P G van den Berg, Stacey Gabriel, Namrata Gupta, Joshua D Smith, Thomas W Blackwell, Jerome I Rotter, Kristin G Ardlie, Ani W Manichaikul, Stephen S Rich, R Graham Barr, Tuuli Lappalainen
Interaction molecular QTL mapping discovers cellular and environmental modifiers of genetic regulatory effects. bioRxiv : the preprint server for biology (2023)
Petko P Fiziev, Jeremy F McRae, Jacob C Ulirsch, Jacqueline S Dron, Tobias Hamp, Yanshen Yang, Pierrick Wainschtein, Zijian Ni, Joshua G Schraiber, Hong Gao, Dylan Cable, Yair Field, François Aguet, Marc Fasnacht, Ahmed A Metwally, Jeffrey Rogers, Tomas Marques-Bonet, Michael J Bamshad, Anne H O'Donnell-Luria, Amit V Khera, Kyle Kai-How Farh
Rare penetrant mutations confer severe risk of common diseases. Science (New York, N.Y.) 380 (6648) (2023)
Liam David Cato, Rick Li, Henry Y Lu, Fulong Yu, Mariel Wissman, Baraka S Mkumbe, Supachai Ekwattanakit, Patrick Deelen, Liberata Alexander Mwita, Raphael Zozimus Sangeda, Thidarat Suksangpleng, Suchada Riolueang, Paola G Bronson, Dirk S Paul, Emily Kawabata, William John Astle, François Aguet, Kristin G Ardlie, Aitzkoa Lopez de Lapuente Portilla, Guolian Kang, Yingze Zhang, Seyed Mehdi Nouraie, Victor R Gordeuk, Mark T Gladwin, Melanie E Garrett, Allison Elizabeth Ashley-Koch, Marilyn J Telen, Brian S Custer, Shannon Kelly, Carla Dinardo, Ester Cerdeira Sabino, Paula Loureiro, Anna Barbara Carneiro-Proietti, Cláudia Máximo, null null, null null, Adriana Mendez, Angelika Hammerer-Lercher, Vivien A Sheehan, Mitchell J Weiss, Lude H Franke, Björn Nilsson, Adam S Butterworth, Vip Viprakasit, Siana Nkya, Vijay G Sankaran
Genetic regulation of fetal hemoglobin across global populations. medRxiv : the preprint server for health sciences (2023)
Lei Hou, Xushen Xiong, Yongjin Park, Carles A Boix, Benjamin T James, Na Sun, Liang He, Aman Patel, Zhizhuo Zhang, Benoit Molinie, Nicholas Van Wittenberghe, Scott Steelman, Chad Nusbaum, François Aguet, Kristin G Ardlie, Manolis Kellis
Multitissue H3K27ac profiling of GTEx samples links epigenomic variation to disease. Nature genetics (2023)
Elle M Weeks, Jacob C Ulirsch, Nathan Y Cheng, Brian L Trippe, Rebecca S Fine, Jenkai Miao, Tejal A Patwardhan, Masahiro Kanai, Joseph Nasser, Charles P Fulco, Katherine C Tashman, François Aguet, Taibo Li, Jose Ordovas-Montanes, Christopher S Smillie, Moshe Biton, Alex K Shalek, Ashwin N Ananthakrishnan, Ramnik J Xavier, Aviv Regev, Rajat M Gupta, Kasper Lage, Kristin G Ardlie, Joel N Hirschhorn, Eric S Lander, Jesse M Engreitz, Hilary K Finucane
Leveraging polygenic enrichments of gene features to predict genes underlying complex traits and diseases. Nature genetics (2023)
Lukas F K Kuderna, Jacob C Ulirsch, Sabrina Rashid, Mohamed Ameen, Laksshman Sundaram, Glenn Hickey, Anthony J Cox, Hong Gao, Arvind Kumar, François Aguet, Matthew J Christmas, Hiram Clawson, Maximilian Haeussler, Mareike C Janiak, Martin Kuhlwilm, Joseph D Orkin, Thomas Bataillon, Shivakumara Manu, Alejandro Valenzuela, Juraj Bergman, Marjolaine Rousselle, Felipe Ennes Silva, Lidia Agueda, Julie Marie Blanc, Marta Gut, Dorien de Vries, Ian B Goodhead, R Alan Harris, Muthuswamy Raveendran, Axel Jensen, Idriss S Chuma, Julie E Horvath, Christina Hvilsom, David Juan, Peter Frandsen, Joshua G Schraiber, Fabiano R de Melo, Fabrício Bertuol, Hazel Byrne, Iracilda Sampaio, Izeni Pires Farias, João Valsecchi do Amaral, Malu Messias, Maria N F da Silva, Mihir Trivedi, Rogerio Rossi, Tomas Hrbek, Nicole Andriaholinirina, Clément J Rabarivola, Alphonse Zaramody, Clifford J Jolly, Jane Phillips-Conroy, Gregory K Wilkerson, Christian Abee, Joe H Simmons, Eduardo Fernández-Duque, Sree Kanthaswamy, Fekadu Shiferaw, Dong-Dong Wu, Long Zhou, Yong Shao, Guojie Zhang, Julius D Keyyu, Sascha Knauf, Minh D Le, Esther Lizano, Stefan Merker, Arcadi Navarro, Tilo Nadler, Chiea Chuen Khor, Jessica Lee, Patrick Boon-Ooi Tan, Weng Khong Lim, Andrew C Kitchener, Dietmar Zinner, Ivo Glynne Gut, Amanda Dawn Melin, Katerina Guschanski, Mikkel Heide Schierup, Robin M D Beck, Ioannis Karakikes, Kevin C Wang, Govindhaswamy Umapathy, Christian Roos, Jean Phillipe Boubli, Adam C Siepel, Anshul Kundaje, Benedict Paten, Kerstin Lindblad-Toh, Jeffrey Rogers, Tomas Marques-Bonet, Kyle Kai-How Farh
Identification of constrained sequence elements across 239 primate genomes. Nature (2023)
Hong Gao, Tobias Hamp, Jeffrey Ede, Joshua G Schraiber, Jeremy F McRae, Moriel H Singer-Berk, Yanshen Yang, Anastasia S D Dietrich, Petko P Fiziev, Lukas F K Kuderna, Laksshman Sundaram, Yibing Wu, Aashish N Adhikari, Yair Field, Chen Chen, Serafim Batzoglou, François Aguet, Gabrielle Lemire, Rebecca Reimers, Daniel J Balick, Mareike C Janiak, Martin Kuhlwilm, Joseph D Orkin, Shivakumara Manu, Alejandro Valenzuela, Juraj Bergman, Marjolaine Rousselle, Felipe Ennes Silva, Lidia Agueda, Julie Marie Blanc, Marta Gut, Dorien de Vries, Ian B Goodhead, Ronald Alan Harris, Muthuswamy Raveendran, Axel Jensen, Idrissa S Chuma, Julie E Horvath, Christina Hvilsom, David Juan, Peter Frandsen, Fabiano Rodrigues de Melo, Fabrício Bertuol, Hazel Byrne, Iracilda Sampaio, Izeni Pires Farias, João Valsecchi do Amaral, Mariluce Rezende Messias, Maria N F da Silva, Mihir Trivedi, Rogério Vieira Rossi, Tomas Hrbek, Nicole Andriaholinirina, Clément J Rabarivola, Alphonse Zaramody, Clifford J Jolly, Jane E Phillips-Conroy, Gregory K Wilkerson, Christian Abee, Joe H Simmons, Eduardo Fernández-Duque, Sree Kanthaswamy, Fekadu Shiferaw, Dong-Dong Wu, Long Zhou, Yong Shao, Guo-Jie Zhang, Julius D Keyyu, Sascha Knauf, Quyen Hanh Do, Esther Lizano, Stefan Merker, Arcadi Navarro, Thomas Bataillon, Tilo Nadler, Chiea Chuen Khor, Jessica Lee, Patrick Boon-Ooi Tan, Weng Khong Lim, Andrew C Kitchener, Dietmar Zinner, Ivo Glynne Gut, Amanda Dawn Melin, Katerina Guschanski, Mikkel Heide Schierup, Robin M D Beck, Govindhaswamy Umapathy, Christian Roos, Jean Phillipe Boubli, Monkol Lek, Shamil R Sunyaev, Anne H O'Donnell-Luria, Michael J Bamshad, Jinbo Xu, Jeffrey Rogers, Tomas Marques-Bonet, Kyle Kai-How Farh
The landscape of tolerated genetic variation in humans and primates. Science (New York, N.Y.) 380 (6648) (2023)
Ryan Schubert, Elyse Geoffroy, Isabelle Gregga, Ashley J Mulford, François Aguet, Kristin G Ardlie, Robert Gerszten, Andrew T Chan, David Van Den Berg, Kent D Taylor, Peter Durda, W Craig Johnson, Elaine Cornell, Xiuqing Guo, Yongmei Liu, Russell Tracy, Matthew P Conomos, Tom Blackwell, George Papanicolaou, Tuuli Lappalainen, Anna V Mihkaylova, Timothy A Thornton, Michael H Cho, Christopher R Gignoux, Leslie Lange, Ethan Lange, Stephen S Rich, Jerome I Rotter, null null, Ani W Manichaikul, Hae Kyung Im, Heather E Wheeler
Protein prediction for trait mapping in diverse populations. PloS one 17 (2) (2022)
Rebecca Boiarsky, Nicholas J Haradhvala, Jean-Baptiste Alberge, Romanos Sklavenitis-Pistofidis, Tarek H Mouhieddine, Oksana Zavidij, Ming-Chieh Shih, Danielle Firer, Mendy Miller, Habib El-Khoury, Shankara K Anand, François Aguet, David A Sontag, Irene M Ghobrial, Gad A Getz
Single cell characterization of myeloma and its precursor conditions reveals transcriptional signatures of early tumorigenesis. Nature communications 13 (1) (2022)
Gökçen Eraslan, Eugene Drokhlyansky, Shankara K Anand, Evgenij Fiskin, Ayshwarya Subramanian, Michal Slyper, Jiali Wang, Nicholas Van Wittenberghe, John M Rouhana, Julia Waldman, Orr Ashenberg, Monkol Lek, Danielle Dionne, Thet Su Win, Michael S Cuoco, Olena Kuksenko, Alexander M Tsankov, Philip A Branton, Jamie L Marshall, Anna Greka, Gad A Getz, Ayellet V Segrè, François Aguet, Orit Rozenblatt-Rosen, Kristin G Ardlie, Aviv Regev
Single-nucleus cross-tissue molecular reference maps toward understanding disease gene function. Science (New York, N.Y.) 376 (6594) (2022)
Tomer M Yaron, Brook E Heaton, Tyler M Levy, Jared L Johnson, Tristan X Jordan, Benjamin M Cohen, Alexander Kerelsky, Ting-Yu Lin, Katarina M Liberatore, Danielle K Bulaon, Samantha J Van Nest, Nikos Koundouros, Edward R Kastenhuber, Marisa N Mercadante, Kripa Shobana-Ganesh, Long He, Robert E Schwartz, Shuibing Chen, Harel Weinstein, Olivier Elemento, Elena Piskounova, Benjamin E Nilsson-Payant, Gina Lee, Joseph D Trimarco, Kaitlyn N Burke, Cait E Hamele, Ryan R Chaparian, Alfred T Harding, Aleksandra Tata, Xinyu Zhu, Purushothama Rao Tata, Clare M Smith, Anthony P Possemato, Sasha L Tkachev, Peter V Hornbeck, Sean A Beausoleil, Shankara K Anand, François Aguet, Gad A Getz, Andrew D Davidson, Kate J Heesom, Maia Kavanagh Williamson, David A Matthews, Benjamin R tenOever, Lewis C Cantley, John Blenis, Nicholas S Heaton
Host protein kinases required for SARS-CoV-2 nucleocapsid phosphorylation and viral replication. Science signaling 15 (757) (2022)
Binyamin Asher Knisbacher, Ziao Lin, Cynthia K Hahn, Ferran Nadeu, Martí Duran-Ferrer, Kristen E Stevenson, Eugen Tausch, Julio Delgado, Alex Barbera-Mourelle, Amaro Taylor-Weiner, Pablo Bousquets Muñoz, Ander Díaz-Navarro, Andrew Dunford, Shankara Anand, Helene Kretzmer, Jesus Gutierrez-Abril, Sara López-Tamargo, Stacey M Fernandes, Clare Sun, Mariela Sivina, Laura Z Rassenti, Christof Schneider, Shuqiang Li, Laxmi Parida, Alexander Meissner, François Aguet, Jan A Burger, Adrian Wiestner, Thomas J Kipps, Jennifer R Brown, Michael Hallek, Chip Stewart, Donna S Neuberg, José Ignacio Martin-Subero, Xose S Puente, Stephan Stilgenbauer, Catherine J Wu, Elias Campo, Gad A Getz
Molecular map of chronic lymphocytic leukemia and its impact on outcome. Nature genetics 54 (11) (2022)
Mark Bustoros, Shankara Anand, Romanos Sklavenitis-Pistofidis, Robert A Redd, Eileen Mary Boyle, Benny Zhitomirsky, Andrew J Dunford, Yu-Tzu Tai, Selina J Chavda, Cody Boehner, Carl Jannes Neuse, Mahshid Rahmat, Andrew T Hutchinson, Tineke Casneuf, Raluca Verona, Efstathis Kastritis, Lorenzo Trippa, Chip Stewart, Brian A Walker, Faith E Davies, Meletios- Athanasios Dimopoulos, Peter Leif Bergsagel, Kwee L Yong, Gareth J Morgan, François Aguet, Gad A Getz, Irene M Ghobrial
Genetic subtypes of smoldering multiple myeloma are associated with distinct pathogenic phenotypes and clinical outcomes. Nature communications 13 (1) (2022)
Qin Li, Michael J Gloudemans, Jonathan M Geisinger, Boming Fan, François Aguet, Tao Sun, Gokul Ramaswami, Yang I Li, Jin-Biao Ma, Jonathan K Pritchard, Stephen B Montgomery, Jin Billy Li
RNA editing underlies genetic risk of common inflammatory diseases. Nature 608 (7923) (2022)
Elise D Flynn, Athena L Tsu, Silva Kasela, Sarah Kim-Hellmuth, François Aguet, Kristin G Ardlie, Harmen J Bussemaker, Pejman Mohammadi, Tuuli Lappalainen
Transcription factor regulation of eQTL activity across individuals and tissues. PLoS genetics 18 (1) (2022)
Dafni A Glinos, Garrett Garborcauskas, Paul J Hoffman, Nava Ehsan, Lihua Jiang, Alper Gokden, Xiaoguang Dai, François Aguet, Kathleen L Brown, Kiran Garimella, Tera Bowers, Maura Costello, Kristin Ardlie, Ruiqi Jian, Nathan R Tucker, Patrick T Ellinor, Eoghan D Harrington, Hua Tang, Michael Paul Snyder, Sissel Juul, Pejman Mohammadi, Daniel G MacArthur, Tuuli Lappalainen, Beryl B Cummings
Transcriptome variation in human tissues revealed by long-read sequencing. Nature 608 (7922) (2022)
Jessica W Tsai, Paloma Cejas, Dayle K Wang, Smruti K Patel, David W Wu, Phonepasong Arounleut, Xin Wei, Ningxuan Zhou, Sudeepa Syamala, Frank P B Dubios, Alexander Crane, Kristine Pelton, Jayne Vogelzang, Cecilia Sousa, Audrey Baguette, Xiaolong Chen, Alexandra-Larisa Condurat, Sarah E Dixon-Clarke, Kevin Ning Zhou, Sophie D Lu, Elizabeth M Gonzalez, Madison S Chacon, Jeromy J Digiacomo, Rushil Kumbhani, Dana R Novikov, J'Ya Hunter, Maria Tsoli, David S Ziegler, Uta Dirksen, Natalie Jager, Gnana Prakash Balasubramanian, Christof Maria Kramm, Michaela Nathrath, Stefan S Bielack, Suzanne J Baker, Jinghui Zhang, James M McFarland, Gad A Getz, François Aguet, Nada Jabado, Olaf Witt, Stefan M Pfister, Keith L Ligon, Volker Hovestadt, Claudia L Kleinman, Henry W Long, David T W Jones, Pratiti Bandopadhayay, Timothy N Phoenix
FOXR2 Is an Epigenetically Regulated Pan-Cancer Oncogene That Activates ETS Transcriptional Circuits. Cancer research 82 (17) (2022)
Yanyu Liang, François Aguet, Alvaro N Barbeira, Kristin Ardlie, Hae Kyung Im
A scalable unified framework of total and allele-specific counts for cis-QTL, fine-mapping, and prediction. Nature communications 12 (1) (2021)
Tamara Ouspenskaia, Travis Law, Karl R Clauser, Susan Klaeger, Siranush Sarkizova, François Aguet, Bo Li, Elena Christian, Binyamin Asher Knisbacher, Phuong M Le, Christina R Hartigan, Hasmik Keshishian, Annie Apffel, Giacomo Oliveira, Wandi Zhang, Sarah Chen, Yuen Ting Chow, Zhe Ji, Irwin Jungreis, Sachet A Shukla, Sune Justesen, Pavan Bachireddy, Manolis Kellis, Gad A Getz, Nir Hacohen, Derin B Keskin, Steven A Carr, Catherine J Wu, Aviv Regev
Unannotated proteins expand the MHC-I-restricted immunopeptidome in cancer. Nature biotechnology (2021)
Qingbo S Wang, David R Kelley, Jacob C Ulirsch, Masahiro Kanai, Shuvom Sadhuka, Ran Cui, Carlos Albors, Nathan Cheng, Yukinori Okada, null null, François Aguet, Kristin G Ardlie, Daniel G MacArthur, Hilary K Finucane
Leveraging supervised learning for functionally informed fine-mapping of cis-eQTLs identifies an additional 20,913 putative causal eQTLs. Nature communications 12 (1) (2021)
Xin Hong, Whijae Roh, Ryan J Sullivan, Keith H K Wong, Ben S Wittner, Hongshan Guo, Taronish D Dubash, Moshe Sade-Feldman, Benjamin Wesley, Elad Horwitz, Genevieve Marie Boland, Dieuwke L Marvin, Todd Bonesteel, Chenyue Lu, François Aguet, Risa Burr, Samuel S Freeman, Laxmi Parida, Katherine Calhoun, Michelle K Jewett, Linda T Nieman, Nir Hacohen, Anders M Näär, David Tsai Ting, Mehmet Toner, Shannon L Stott, Gad A Getz, Shyamala Maheswaran, Daniel A Haber
The Lipogenic Regulator SREBP2 Induces Transferrin in Circulating Melanoma Cells and Suppresses Ferroptosis. Cancer discovery 11 (3) (2020)
Nicole M Ferraro, Benjamin J Strober, Jonah Einson, Nathan S Abell, François Aguet, Alvaro N Barbeira, Margot Brandt, Maja Bucan, Stephane E Castel, Joe R Davis, Emily Greenwald, Gaelen T Hess, Austin T Hilliard, Rachel L Kember, Bence Kotis, YoSon Park, Gina Peloso, Shweta Ramdas, Alexandra J Scott, Craig Smail, Emily K Tsang, Seyedeh Maryam Zekavat, Marcello Ziosi, null Aradhana, null null, Kristin G Ardlie, Themistocles L Assimes, Michael C Bassik, Christopher D Brown, Adolfo Correa, Ira Hall, Hae Kyung Im, Xin Li, Pradeep Natarajan, null null, Tuuli Lappalainen, Pejman Mohammadi, Stephen B Montgomery, Alexis J Battle
Transcriptomic signatures across human tissues identify functional rare genetic variation. Science (New York, N.Y.) 369 (6509) (2020)
Sarah Kim-Hellmuth, François Aguet, Meritxell Oliva, Manuel Muñoz-Aguirre, Silva Kasela, Valentin Wucher, Stephane E Castel, Andrew R Hamel, Ana Viñuela, Amy L Roberts, Serghei Mangul, Xiaoquan Wen, Gao Wang, Alvaro N Barbeira, Diego Garrido-Martín, Brian B Nadel, Yuxin Zou, Rodrigo Bonazzola, Jie Quan, Andrew Anand Brown, Angel Martinez-Perez, José Manuel Soria, null null, Gad A Getz, Emmanouil T Dermitzakis, Kerrin S Small, Matthew Stephens, Hualin S Xi, Hae Kyung Im, Roderic Guigo, Ayellet V Segrè, Barbara E Stranger, Kristin G Ardlie, Tuuli Lappalainen
Cell type-specific genetic regulation of gene expression across human tissues. Science (New York, N.Y.) 369 (6509) (2020)
Alvaro N Barbeira, Owen J Melia, Yanyu Liang, Rodrigo Bonazzola, Gao Wang, Heather E Wheeler, François Aguet, Kristin G Ardlie, Xiaoquan Wen, Hae K Im
Fine-mapping and QTL tissue-sharing information improves the reliability of causal gene identification. Genetic epidemiology (2020)
Xutong Zhao, Dandi Qiao, Chaojie Yang, Silva Kasela, Wonji Kim, Yanlin Ma, Nick Shrine, Chiara Batini, Tamar Sofer, Sarah A Gagliano Taliun, Phuwanat Sakornsakolpat, Pallavi P Balte, Dmitry Prokopenko, Bing Yu, Leslie A Lange, Josée Dupuis, Brian E Cade, Jiwon Lee, Sina A Gharib, Michelle Daya, Cecelia A Laurie, Ingo Ruczinski, L Adrienne Cupples, Laura R Loehr, Traci M Bartz, Alanna C Morrison, Bruce M Psaty, Ramachandran S Vasan, James G Wilson, Kent D Taylor, Peter Durda, W Craig Johnson, Elaine Cornell, Xiuqing Guo, Yongmei Liu, Russell P Tracy, Kristin G Ardlie, François Aguet, David Van Den Berg, George J Papanicolaou, Jerome I Rotter, Kathleen C Barnes, Deepti Jain, Deborah A Nickerson, Donna M Muzny, Ginger A Metcalf, Harsha Vardhan Doddapaneni, Shannon Dugan-Perez, Namrata Gupta, Stacey Gabriel, Stephen S Rich, George T O'Connor, Susan Redline, Robert M Reed, Cathy C Laurie, Martha L Daviglus, Liana K Preudhomme, Kristin M Burkart, Robert C Kaplan, Louise V Wain, Martin D Tobin, Stephanie J London, Tuuli Lappalainen, Elizabeth C Oelsner, Gonçalo R Abecasis, Edwin K Silverman, R Graham Barr, null null, null null, Michael H Cho, Ani W Manichaikul
Whole genome sequence analysis of pulmonary function and COPD in 19,996 multi-ethnic participants. Nature communications 11 (1) (2020)
Meritxell Oliva, Manuel Muñoz-Aguirre, Sarah Kim-Hellmuth, Valentin Wucher, Ariel D H Gewirtz, Daniel J Cotter, Princy Parsana, Silva Kasela, Brunilda Balliu, Ana Viñuela, Stephane E Castel, Pejman Mohammadi, François Aguet, Yuxin Zou, Ekaterina A Khramtsova, Andrew D Skol, Diego Garrido-Martín, Ferran Reverter, Andrew Anand Brown, Patrick Evans, Eric R Gamazon, Anthony Payne, Rodrigo Bonazzola, Alvaro N Barbeira, Andrew R Hamel, Angel Martinez-Perez, José Manuel Soria, null null, Brandon L Pierce, Matthew Stephens, Eleazar Eskin, Emmanouil T Dermitzakis, Ayellet V Segrè, Hae Kyung Im, Barbara Elizabeth Engelhardt, Kristin G Ardlie, Stephen B Montgomery, Alexis J Battle, Tuuli Lappalainen, Roderic Guigo, Barbara E Stranger
The impact of sex on gene expression across human tissues. Science (New York, N.Y.) 369 (6509) (2020)
Kathryn Demanelis, Farzana Jasmine, Lin S Chen, Meytal Batya Chernoff, Lin Tong, Dayana Delgado, Chenan Zhang, Justin Shinkle, Mekala Sabarinathan, Hannah Lin, Eduardo Ramirez, Meritxell Oliva, Sarah Kim-Hellmuth, Barbara E Stranger, Tsung-Po Lai, Abraham Aviv, Kristin G Ardlie, François Aguet, Habibul Ahsan, null null, Jennifer Anne Doherty, Muhammad G Kibriya, Brandon L Pierce
Determinants of telomere length across human tissues. Science (New York, N.Y.) 369 (6509) (2020)
Keren Yizhak, François Aguet, Jaegil Kim, Julian M Hess, Kirsten Kübler, Jonna L Grimsby, Ruslana Frazer, Hailei Zhang, Nicholas J Haradhvala, Daniel Rosebrock, Dimitri Livitz, Xiao Li, Eila Arich-Landkof, Noam Shoresh, Chip Stewart, Ayellet V Segrè, Philip A Branton, Paz Polak, Kristin G Ardlie, Gad A Getz
RNA sequence analysis reveals macroscopic somatic clonal expansion across normal tissues. Science (New York, N.Y.) 364 (6444) (2019)
Aparna R Parikh, Ignaty Leshchiner, Liudmila Elagina, Lipika Goyal, Chaya Levovitz, Giulia Siravegna, Dimitri Livitz, Kahn Rhrissorrakrai, Elizabeth E Martin, Emily E Van Seventer, Megan Hanna, Kara Slowik, Filippo Utro, Christopher J Pinto, Alicia Wong, Brian P Danysh, Ferran Fece de la Cruz, Isobel J Fetter, Brandon A Nadres, Heather A Shahzade, Jill N Allen, Lawrence S Blaszkowsky, Jeffrey W Clark, Bruce Giantonio, Janet E Murphy, Ryan D Nipp, Eric Roeland, David P Ryan, Colin D Weekes, Eunice L Kwak, Jason E Faris, Jennifer Y Wo, François Aguet, Ipsita Dey-Guha, Mehlika Hazar-Rethinam, Dora Dias-Santagata, David Tsai Ting, Andrew X Zhu, Theodore S Hong, Todd R Golub, A John Iafrate, Viktor A Adalsteinsson, Alberto Bardelli, Laxmi Parida, Dejan Juric, Gad A Getz, Ryan B Corcoran
Liquid versus tissue biopsy for detecting acquired resistance and tumor heterogeneity in gastrointestinal cancers. Nature medicine 25 (9) (2019)
Stephane E Castel, Alejandra Cervera, Pejman Mohammadi, François Aguet, Ferran Reverter, Aaron Wolman, Roderic Guigo, Ivan Iossifov, Ana Vasileva, Tuuli Lappalainen
Modified penetrance of coding variants by cis-regulatory variation contributes to disease risk. Nature genetics 50 (9) (2018)
Pedro G Ferreira, Manuel Muñoz-Aguirre, Ferran Reverter, Caio P Sá Godinho, Abel Sousa, Alicia Amadoz, Reza Sodaei, Marta R Hidalgo, Dmitri Pervouchine, Jose Carbonell-Caballero, Ramil Nurtdinov, Alessandra Breschi, Raziel Amador, Patrícia Oliveira, Cankut Cubuk, João Curado, François Aguet, Carla Oliveira, Joaquín Dopazo, Michael Sammeth, Kristin G Ardlie, Roderic Guigó
The effects of death and post-mortem cold ischemia on human tissue transcriptomes. Nature communications 9 (1) (2018)
Eric R Gamazon, Ayellet V Segrè, Martijn van de Bunt, Xiaoquan Wen, Hualin S Xi, Farhad Hormozdiari, Halit Ongen, Anuar Konkashbaev, Eske M Derks, François Aguet, Jie Quan, null null, Dan L Nicolae, Eleazar Eskin, Manolis Kellis, Gad A Getz, Mark I McCarthy, Emmanouil T Dermitzakis, Nancy J Cox, Kristin G Ardlie
Using an atlas of gene regulation across 44 human tissues to inform complex disease- and trait-associated variation. Nature genetics 50 (7) (2018)
Naomi Habib, Inbal Avraham-Davidi, Anindita Basu, Tyler Burks, Karthik Shekhar, Matan Hofree, Sourav R Choudhury, François Aguet, Ellen Gelfand, Kristin Ardlie, David A Weitz, Orit Rozenblatt-Rosen, Feng Zhang, Aviv Regev
Massively parallel single-nucleus RNA-seq with DroNc-seq. Nature methods 14 (10) (2017)
Derek Klarin, Qiuyu Martin Zhu, Connor A Emdin, Mark Chaffin, Steven Horner, Brian J McMillan, Alison Leed, Michael E Weale, Chris C A Spencer, François Aguet, Ayellet V Segrè, Kristin G Ardlie, Amit V Khera, Virendar K Kaushik, Pradeep Natarajan, null null, Sekar Kathiresan
Genetic analysis in UK Biobank links insulin resistance and transendothelial migration pathways to coronary artery disease. Nature genetics 49 (9) (2017)

François Aguet.css-eqlu8i{font-size:small;padding-left:4px;} (Francois Aguet)

Publication Activity (10 Years)

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François Aguet (Francois Aguet)