Olivier Lichtarge

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 22

Top Topics

Intellectual Disability

Respiratory Syndrome Coronavirus

Muscular Dystrophy

Top Venues

Research square

Nature communications

Science signaling

This page only lists publications with an associated author ORCID identifier.

Publications

Jitendra Kumar Meena, Jarey H Wang, Nicholas J Neill, Dianne Keough, Nagireddy Putluri, Panagiostis Katsonis, Amanda M Koire, Hyemin Lee, Elizabeth A Bowling, Siddhartha Tyagi, Mayra Orellana, Rocio Dominguez-Vidana, Heyuan Li, Kenneth Eagle, Charles H Danan, Hsiang-Ching Chung, Andrew D Yang, William Wu, Sarah J Kurley, Brian M Ho, Joseph R Zoeller, Calla M Olson, Kristen L Meerbrey, Olivier Lichtarge, Arun Sreekumar, Clifford C Dacso, Luke W Guddat, Dominik Rejman, Dana Hocková, Zlatko Janeba, Lukas M Simon, Charles Y Lin, Monica C Pillon, Thomas F Westbrook
MYC Induces Oncogenic Stress through RNA Decay and Ribonucleotide Catabolism in Breast Cancer. Cancer discovery (2024)
Dillon Shapiro, Kwanghyuk Lee, Jennifer Asmussen, Thomas Bourquard, Olivier Lichtarge
Evolutionary Action-Machine Learning Model Identifies Candidate Genes Associated With Early-Onset Coronary Artery Disease. Journal of the American Heart Association (2023)
Sarah L Stenton, Melanie O'Leary, Gabrielle T Lemire, Grace E VanNoy, Stephanie DiTroia, Vijay S Ganesh, Emily Groopman, Emily O'Heir, Brian Mangilog, Ikeoluwa Osei-Owusu, Lynn S Pais, Jillian G Serrano, Moriel H Singer-Berk, Ben Weisburd, Michael Wilson, Christina Austin-Tse, Marwa Abdelhakim, Azza Thamer Althagafi, Giulia Babbi, Riccardo Bellazzi, Samuele Bovo, Maria Giulia Carta, Rita Casadio, Pieter-Jan Coenen, Federica De Paoli, Matteo Floris, Manavalan Gajapathy, Hoehndorf Robert, Julius O B Jacobsen, Thomas Joseph, Akash Kamandula, Panagiostis Katsonis, Cyrielle Kint, Olivier Lichtarge, Ivan Limongelli, Yulan Lu, Paolo Magni, Tarun Karthik Kumar Mamidi, Pier Luigi Martelli, Marta Mulargia, Giovanna Nicora, Keith Nykamp, Vikas Pejaver, Yisu Peng, Thi Hong Cam Pham, Maurizio S Podda, Aditya Rao, Ettore Rizzo, Vangala G Saipradeep, Castrense Savojardo, Peter Schols, Yang Shen, Naveen Sivadasan, Damian Smedley, Dorian Soru, Rajgopal Srinivasan, Yuanfei Sun, Uma Sunderam, Wuwei Tan, Naina Tiwari, Xiao Wang, Yaqiong Wang, Amanda Williams, Elizabeth A Worthey, Rujie Yin, Yuning You, Daniel Zeiberg, Susanna Zucca, Constantina Bakolitsa, Steven E Brenner, Stephanie Malia Fullerton, Predrag Radivojac, Michael J Bamshad, Anne H O'Donnell-Luria
Critical assessment of variant prioritization methods for rare disease diagnosis within the Rare Genomes Project. medRxiv : the preprint server for health sciences (2023)
Thomas Bourquard, Kwanghyuk Lee, Ismael Al-Ramahi, Minh Pham, Dillon Shapiro, Yashwanth Lagisetty, Shirin Soleimani, Samantha Mota, Kevin Wilhelm, Maryam Samieinasab, Young Won Kim, Eunna Huh, Jennifer Asmussen, Panagiostis Katsonis, Juan Botas, Olivier Lichtarge
Functional variants identify sex-specific genes and pathways in Alzheimer's Disease. Nature communications 14 (1) (2023)
Thomas Bourquard, Kwanghyuk Lee, Ismael Al-Ramahi, Minh Pham, Dillon Shapiro, Yashwanth Lagisetty, Shirin Soleimani, Samantha Mota, Kevin Wilhelm, Maryam Samieinasab, Young Won Kim, Eunna Huh, Jennifer Asmussen, Panagiostis Katsonis, Juan Botas, Olivier Lichtarge
Functional variants identify sex-specific genes and pathways in Alzheimer's Disease. Nature communications 14 (1) (2023)
Thomas Bourquard, Kwanghyuk Lee, Ismael Al-Ramahi, Minh Pham, Dillon Shapiro, Yashwanth Lagisetty, Shirin Soleimani, Samantha Mota, Kevin Wilhelm, Maryam Samieinasab, Young Won Kim, Eunna Huh, Jennifer Asmussen, Panagiostis Katsonis, Juan Botas, Olivier Lichtarge
Functional variants identify sex-specific genes and pathways in Alzheimer's Disease. Nature communications 14 (1) (2023)
Eunna Huh, Jonathan Gallion, Melina A Agosto, Sara J Wright, Theodore G Wensel, Olivier Lichtarge
Recurrent high-impact mutations at cognate structural positions in class A G protein-coupled receptors expressed in tumors. Proceedings of the National Academy of Sciences of the United States of America 118 (51) (2022)
Chen Wang, Daniel M Konecki, David C Marciano, Harikumar Govindarajan, Amanda M Williams, Brigitta Wastuwidyaningtyas, Thomas Bourquard, Panagiostis Katsonis, Olivier Lichtarge
Identification of evolutionarily stable functional and immunogenic sites across the SARS-CoV-2 proteome and the greater coronavirus family. Research square (2021)
Chen Wang, Daniel M Konecki, David C Marciano, Harikumar Govindarajan, Amanda M Williams, Brigitta Wastuwidyaningtyas, Thomas Bourquard, Panagiostis Katsonis, Olivier Lichtarge
Identification of evolutionarily stable functional and immunogenic sites across the SARS-CoV-2 proteome and the greater coronavirus family. Research square (2021)
Chen Wang, Daniel M Konecki, David C Marciano, Harikumar Govindarajan, Amanda M Williams, Brigitta Wastuwidyaningtyas, Thomas Bourquard, Panagiostis Katsonis, Olivier Lichtarge
Identification of evolutionarily stable functional and immunogenic sites across the SARS-CoV-2 proteome and the greater coronavirus family. Research square (2021)
Amanda M Koire, Panagiostis Katsonis, Young Won Kim, Christie Buchovecky, Stephen J Wilson, Olivier Lichtarge
A method to delineate de novo missense variants across pathways prioritizes genes linked to autism. Science translational medicine 13 (594) (2021)
Wyatt T Clark, Laura Kasak, Constantina Bakolitsa, Zhiqiang Hu, Gaia Andreoletti, Giulia Babbi, Yana Bromberg, Rita Casadio, Roland L Dunbrack, Lukas Folkman, Colby T Ford, David Jones, Panagiostis Katsonis, Kunal Kundu, Olivier Lichtarge, Pier Luigi Martelli, Sean D Mooney, Conor Nodzak, Lipika R Pal, Predrag Radivojac, Castrense Savojardo, Xinghua Shi, Yaoqi Zhou, Aneeta Uppal, Qifang Xu, Yizhou Yin, Vikas Pejaver, Meng Wang, Liping Wei, John Moult, Guoying Karen Yu, Steven E Brenner, Jonathan H LeBowitz
Assessment of predicted enzymatic activity of α-N-acetylglucosaminidase variants of unknown significance for CAGI 2016. Human mutation 40 (9) (2020)
Chen Wang, Daniel M Konecki, David C Marciano, Harikumar Govindarajan, Amanda M Williams, Brigitta Wastuwidyaningtyas, Thomas Bourquard, Panagiostis Katsonis, Olivier Lichtarge
Identification of evolutionarily stable sites across the SARS-CoV-2 proteome. Research square (2020)
Ilya B Novikov, Angela D Wilkins, Olivier Lichtarge
An Evolutionary Trace method defines functionally important bases and sites common to RNA families. PLoS computational biology 16 (3) (2020)
Alexander Miguel Monzon, Marco Carraro, Luigi Chiricosta, Francesco Reggiani, James Han, Kivilcim Ozturk, Yanran Wang, Maximilian Miller, Yana Bromberg, Emidio Capriotti, Castrense Savojardo, Giulia Babbi, Pier L Martelli, Rita Casadio, Panagiostis Katsonis, Olivier Lichtarge, Hannah Carter, Maria Kousi, Nicholas Katsanis, Gaia Andreoletti, John Moult, Steven E Brenner, Carlo Ferrari, Emanuela Leonardi, Silvio C E Tosatto
Performance of computational methods for the evaluation of pericentriolar material 1 missense variants in CAGI-5. Human mutation 40 (9) (2019)
Melissa S Cline, Giulia Babbi, Sandra Bonache, Yue Cao, Rita Casadio, Xavier de la Cruz, Orland Díez, Sara Gutiérrez-Enríquez, Panagiostis Katsonis, Carmen Lai, Olivier Lichtarge, Pier Luigi Martelli, Gilad Mishne, Alejandro Moles-Fernández, Gemma Montalban, Sean D Mooney, Robert O'Conner, Lars Ootes, Selen Özkan, Natalia Padilla, Kymberleigh A Pagel, Vikas Pejaver, Predrag Radivojac, Casandra Riera, Castrense Savojardo, Yang Shen, Yuanfei Sun, Scott Topper, Michael T Parsons, Amanda B Spurdle, David E Goldgar, null null
Assessment of blind predictions of the clinical significance of BRCA1 and BRCA2 variants. Human mutation 40 (9) (2019)
Vikas Pejaver, Giulia Babbi, Rita Casadio, Lukas Folkman, Panagiostis Katsonis, Kunal Kundu, Olivier Lichtarge, Pier Luigi Martelli, Maximilian Miller, John Moult, Lipika R Pal, Castrense Savojardo, Yizhou Yin, Yaoqi Zhou, Predrag Radivojac, Yana Bromberg
Assessment of methods for predicting the effects of PTEN and TPMT protein variants. Human mutation 40 (9) (2019)
Marco Carraro, Alexander Miguel Monzon, Luigi Chiricosta, Francesco Reggiani, Maria Cristina Aspromonte, Mariagrazia Bellini, Kymberleigh Pagel, Yuxiang Jiang, Predrag Radivojac, Kunal Kundu, Lipika R Pal, Yizhou Yin, Ivan Limongelli, Gaia Andreoletti, John Moult, Stephen J Wilson, Panagiostis Katsonis, Olivier Lichtarge, Jingqi Chen, Yaqiong Wang, Zhiqiang Hu, Steven E Brenner, Carlo Ferrari, Alessandra Murgia, Silvio C E Tosatto, Emanuela Leonardi
Assessment of patient clinical descriptions and pathogenic variants from gene panel sequences in the CAGI-5 intellectual disability challenge. Human mutation 40 (9) (2019)
Panagiostis Katsonis, Olivier Lichtarge
CAGI5: Objective performance assessments of predictions based on the Evolutionary Action equation. Human mutation 40 (9) (2019)
Laura Kasak, Constantina Bakolitsa, Zhiqiang Hu, Changhua Yu, Jasper Rine, Dago F Dimster-Denk, Gaurav Pandey, Greet De Baets, Yana Bromberg, Chen Cao, Emidio Capriotti, Rita Casadio, Joost Van Durme, Manuel Giollo, Rachel Karchin, Panagiostis Katsonis, Emanuela Leonardi, Olivier Lichtarge, Pier Luigi Martelli, David Masica, Sean D Mooney, Ayodeji Olatubosun, Predrag Radivojac, Frederic Rousseau, Lipika R Pal, Castrense Savojardo, Joost Schymkowitz, Janita Thusberg, Silvio C E Tosatto, Mauno Vihinen, Jouni Väliaho, Susanna Repo, John Moult, Steven E Brenner, Iddo Friedberg
Assessing computational predictions of the phenotypic effect of cystathionine-beta-synthase variants. Human mutation 40 (9) (2019)
Laura Kasak, Jesse M Hunter, Rupa Udani, Constantina Bakolitsa, Zhiqiang Hu, Aashish N Adhikari, Giulia Babbi, Rita Casadio, Julian Gough, Rafael F Guerrero, Yuxiang Jiang, Thomas Joseph, Panagiostis Katsonis, Sujatha Kotte, Kunal Kundu, Olivier Lichtarge, Pier Luigi Martelli, Sean D Mooney, John Moult, Lipika R Pal, Jennifer Poitras, Predrag Radivojac, Aditya Rao, Naveen Sivadasan, Uma Sunderam, V G Saipradeep, Yizhou Yin, Jan Zaucha, Steven E Brenner, M Stephen Meyn
CAGI SickKids challenges: Assessment of phenotype and variant predictions derived from clinical and genomic data of children with undiagnosed diseases. Human mutation 40 (9) (2019)
Angeliki Karamitri, Bianca Plouffe, Amélie Bonnefond, Min Chen, Jonathan Gallion, Jean-Luc Guillaume, Alan Hegron, Mathilde Boissel, Mickaël Canouil, Claudia Langenberg, Nicholas J Wareham, Christian Le Gouill, Viktoriya Lukasheva, Olivier Lichtarge, Philippe Froguel, Michel Bouvier
Type 2 diabetes-associated variants of the MT2 melatonin receptor affect distinct modes of signaling. Science signaling 11 (545) (2018)