Ronan M T Fleming (Ronan Mt Fleming)

Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2016-2024
Publications (10 Years): 13

Top Venues

NPJ Parkinson's disease

Nature biotechnology

Bioinformatics (Oxford, England)

Molecular systems biology

Universiteit Leiden

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Universiteit Leiden

Netherlands

Assistant Professor :: Systems Biomedicine and Pharmacology

University of Luxembourg Apr 01 2013

Luxembourg

Principal investigator :: Luxembourg Centre for Systems Biomedicine

Publications

Xi Luo, Yanjun Liu, Alexander Balck, Christine Klein, Ronan M T Fleming
Identification of metabolites reproducibly associated with Parkinson's Disease via meta-analysis and computational modelling. NPJ Parkinson's disease 10 (1) (2024)
Farid Zare, Ronan M T Fleming
Integration of proteomic data with genome-scale metabolic models: A methodological overview. Protein science : a publication of the Protein Society 33 (10) (2024)
Xi Luo, Yanjun Liu, Alexander Balck, Christine Klein, Ronan M T Fleming
Identification of metabolites reproducibly associated with Parkinson's Disease via meta-analysis and computational modelling. NPJ Parkinson's disease 10 (1) (2024)
Xi Luo, Yanjun Liu, Alexander Balck, Christine Klein, Ronan M T Fleming
Identification of metabolites reproducibly associated with Parkinson's Disease via meta-analysis and computational modelling. NPJ Parkinson's disease 10 (1) (2024)
Almut Heinken, Timothy Otto Hulshof, Bram Nap, Filippo Martinelli, Arianna Basile, Amy O'Brolchain, Neil Francis O'Sullivan, Celine Gallagher, Eimer Magee, Francesca McDonagh, Ian Lalor, Maeve Bergin, Phoebe Evans, Rachel Daly, Ronan Farrell, Rose Marie Delaney, Saoirse Hill, Saoirse Roisin McAuliffe, Trevor Kilgannon, Ronan M T Fleming, Cyrille C Thinnes, Ines Thiele
APOLLO: A genome-scale metabolic reconstruction resource of 247,092 diverse human microbes spanning multiple continents, age groups, and body sites. bioRxiv : the preprint server for biology (2023)
Alise Zagare, German Preciat, Sarah L Nickels, Xi Luo, Anna S Monzel, Gemma Gomez-Giro, Graham Robertson, Christian Jaeger, Jafar Sharif, Haruhiko Koseki, Nico J Diederich, Enrico Glaab, Ronan M T Fleming, Jens Christian Schwamborn
Omics data integration suggests a potential idiopathic Parkinson's disease signature. Communications biology 6 (1) (2023)
Ronan M T Fleming, Hulda S Haraldsdottir, Le Hoai Minh, Phan Tu Vuong, Thomas Hankemeier, Ines Thiele
Cardinality optimization in constraint-based modelling: application to human metabolism. Bioinformatics (Oxford, England) 39 (9) (2023)
Ines Thiele, German Preciat, Ronan M T Fleming
MetaboAnnotator: an efficient toolbox to annotate metabolites in genome-scale metabolic reconstructions. Bioinformatics (Oxford, England) 38 (20) (2022)
Ines Thiele, Swagatika Sahoo, Almut Heinken, Johannes Hertel, Laurent Heirendt, Maike K Aurich, Ronan M T Fleming
Personalized whole-body models integrate metabolism, physiology, and the gut microbiome. Molecular systems biology 16 (5) (2021)
Christian Lieven, Moritz Emanuel Beber, Brett G Olivier, Frank T Bergmann, Meric Ataman, Parizad Babaei, Jennifer A Bartell, Lars M Blank, Siddharth Chauhan, Kevin Correia, Christian Diener, Andreas Dräger, Birgitta E Ebert, Janaka N Edirisinghe, José P Faria, Adam M Feist, Georgios Fengos, Ronan M T Fleming, Beatriz García-Jiménez, Vassily Hatzimanikatis, Wout van Helvoirt, Christopher S Henry, Henning Hermjakob, Markus J Herrgård, Ali Kaafarani, Hyun Uk Kim, Zachary A King, Steffen Klamt, Edda Klipp, Jasper J Koehorst, Matthias König, Meiyappan Lakshmanan, Dong-Yup Lee, Sang Yup Lee, Sunjae Lee, Nathan E Lewis, Filipe Liu, Hongwu Ma, Daniel Machado, Radhakrishnan Mahadevan, Paulo Maia, Adil Mardinglu, Gregory L Medlock, Jonathan M Monk, Jens B Nielsen, Lars Keld Nielsen, Juan Nogales, Intawat Nookaew, Bernhard O Palsson, Jason A Papin, Kiran Raosaheb Patil, Mark G Poolman, Nathan D Price, Osbaldo Resendis-Antonio, Anne Richelle, Isabel Rocha, Benjamín J Sánchez, Peter J Schaap, Rahuman S Malik Sheriff, Saeed Shoaie, Nikolaus Sonnenschein, Bas Teusink, Paulo Vilaça, Jon Olav Vik, Judith A H Wodke, Joana C Xavier, Qianqian Yuan, Maksim Zakhartsev, Cheng Zhang
MEMOTE for standardized genome-scale metabolic model testing. Nature biotechnology 38 (3) (2020)
Elizabeth Brunk, Swagatika Sahoo, Daniel C Zielinski, Ali Altunkaya, Andreas Dräger, Nathan Mih, Francesco Gatto, Avlant Nilsson, German Andres Preciat Gonzalez, Maike Kathrin Aurich, Andreas Prlić, Anand Sastry, Anna D Danielsdottir, Almut Heinken, Alberto Noronha, Peter W Rose, Stephen K Burley, Ronan M T Fleming, Jens B Nielsen, Ines Thiele, Bernhard O Palsson
Recon3D enables a three-dimensional view of gene variation in human metabolism. Nature biotechnology 36 (3) (2018)
Miguel A P Oliveira, Rudi Balling, Marten P Smidt, Ronan M T Fleming
Embryonic development of selectively vulnerable neurons in Parkinson's disease. NPJ Parkinson's disease 3 (2017)
Stefanía Magnúsdóttir, Almut Heinken, Laura Kutt, Dmitry A Ravcheev, Eugen Bauer, Alberto Noronha, Kacy Greenhalgh, Christian Jäger, Joanna Baginska, Paul Wilmes, Ronan M T Fleming, Ines Thiele
Generation of genome-scale metabolic reconstructions for 773 members of the human gut microbiota. Nature biotechnology 35 (1) (2016)

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Publication Activity (10 Years)

Top Topics

Top Venues

Ronan M T Fleming (Ronan Mt Fleming)