Radhakrishnan Mahadevan

ResearcherID ORCID

Publication Activity (10 Years)

Years Active: 2016-2024
Publications (10 Years): 31

Top Topics

Escherichia Coli

Transcription Factor

Top Venues

ACS synthetic biology

Nature communications

Journal of industrial microbiology & biotechnology

PLoS computational biology

This page only lists publications with an associated author ORCID identifier.

Publications

Chester Pham, Peter J Stogios, Alexei Savchenko, Radhakrishnan Mahadevan
Design and Characterization of a Generalist Biosensor for Indole Derivatives. ACS synthetic biology (2024)
Chester Pham, Mohamed A Nasr, Tatiana Skarina, Rosa Di Leo, David H Kwan, Vincent J J Martin, Peter J Stogios, Radhakrishnan Mahadevan, Alexei Savchenko
Functional and structural characterization of an IclR family transcription factor for the development of dicarboxylic acid biosensors. The FEBS journal 291 (15) (2024)
Ruhi Choudhary, Radhakrishnan Mahadevan
FOCUS on NOD2: Advancing IBD Drug Discovery with a User-Informed Machine Learning Framework. ACS medicinal chemistry letters 15 (7) (2024)
Ethan Agena, Ian M Gois, Connor M Bowers, Radhakrishnan Mahadevan, Matthew J Scarborough, Christopher E Lawson
Evaluating the feasibility of medium chain oleochemical synthesis using microbial chain elongation. Journal of industrial microbiology & biotechnology (2024)
Ruhi Choudhary, Radhakrishnan Mahadevan
FOCUS on NOD2: Advancing IBD Drug Discovery with a User-Informed Machine Learning Framework. ACS medicinal chemistry letters 15 (7) (2024)
Chester Pham, Peter J Stogios, Alexei Savchenko, Radhakrishnan Mahadevan
Design and Characterization of a Generalist Biosensor for Indole Derivatives. ACS synthetic biology 13 (7) (2024)
Chester Pham, Mohamed A Nasr, Tatiana Skarina, Rosa Di Leo, David H Kwan, Vincent J J Martin, Peter J Stogios, Radhakrishnan Mahadevan, Alexei Savchenko
Functional and structural characterization of an IclR family transcription factor for the development of dicarboxylic acid biosensors. The FEBS journal (2024)
Meenakshi Venkatesan, Michael Fruci, Lou Ann Verellen, Tatiana Skarina, Nathalie Mesa, Robert Flick, Chester Pham, Radhakrishnan Mahadevan, Peter J Stogios, Alexei Savchenko
Molecular mechanism of plasmid-borne resistance to sulfonamide antibiotics. Nature communications 14 (1) (2023)
Olivia Bulka, Jennifer Webb, Sandra Dworatzek, Radhakrishnan Mahadevan, Elizabeth A Edwards
A Multifunctional Dehalobacter ? Tandem Chloroform and Dichloromethane Degradation in a Mixed Microbial Culture. Environmental science & technology (2023)
Yilan Liu, Jin-Jin Chen, Kaushik Raj, Lauren Baerg, Nayanan Nathan, Dana J Philpott, Radhakrishnan Mahadevan
A Universal Strategy to Promote Secretion of G+/G- Bacterial Extracellular Vesicles and Its Application in Host Innate Immune Responses. ACS synthetic biology 12 (1) (2023)
Jin-Jin Chen, Yilan Liu, Radhakrishnan Mahadevan
Genetic Engineering of Acidithiobacillus ferridurans Using CRISPR Systems To Mitigate Toxic Release in Biomining. Environmental science & technology (2023)
Yilan Liu, Jin-Jin Chen, Kaushik Raj, Lauren Baerg, Nayanan Nathan, Dana J Philpott, Radhakrishnan Mahadevan
A Universal Strategy to Promote Secretion of G+/G- Bacterial Extracellular Vesicles and Its Application in Host Innate Immune Responses. ACS synthetic biology 12 (1) (2023)
Yilan Liu, Jin-Jin Chen, Kaushik Raj, Lauren Baerg, Nayanan Nathan, Dana J Philpott, Radhakrishnan Mahadevan
A Universal Strategy to Promote Secretion of G+/G- Bacterial Extracellular Vesicles and Its Application in Host Innate Immune Responses. ACS synthetic biology 12 (1) (2023)
Yilan Liu, Jin-Jin Chen, Kaushik Raj, Lauren Baerg, Nayanan Nathan, Dana J Philpott, Radhakrishnan Mahadevan
A Universal Strategy to Promote Secretion of G+/G- Bacterial Extracellular Vesicles and Its Application in Host Innate Immune Responses. ACS synthetic biology (2023)
Kiandokht Haddadi, Rana Ahmed Barghout, Radhakrishnan Mahadevan
KinMod database: a tool for investigating metabolic regulation. Database : the journal of biological databases and curation 2022 (2022)
Aditya Vikram Pandit, Emma Harrison, Radhakrishnan Mahadevan
Engineering Escherichia coli for the utilization of ethylene glycol. Microbial cell factories 20 (1) (2021)
Kaushik Raj, Naveen Venayak, Patrick Diep, Sai Akhil Golla, Alexander F Yakunin, Radhakrishnan Mahadevan
Automation assisted anaerobic phenotyping for metabolic engineering. Microbial cell factories 20 (1) (2021)
Philipp Schneider, Radhakrishnan Mahadevan, Steffen Klamt
Systematizing the different notions of growth-coupled product synthesis and a single framework for computing corresponding strain designs. Biotechnology journal 16 (12) (2021)
Leo Zhu, William Pei, Ines Thiele, Radhakrishnan Mahadevan
Integration of a physiologically-based pharmacokinetic model with a whole-body, organ-resolved genome-scale model for characterization of ethanol and acetaldehyde metabolism. PLoS computational biology 17 (8) (2021)
Dafni Giannari, Cleo Hanchen Ho, Radhakrishnan Mahadevan
A gap-filling algorithm for prediction of metabolic interactions in microbial communities. PLoS computational biology 17 (11) (2021)
Steffen Klamt, Radhakrishnan Mahadevan, Axel von Kamp
Speeding up the core algorithm for the dual calculation of minimal cut sets in large metabolic networks. BMC bioinformatics 21 (1) (2020)
Kevin Correia, Radhakrishnan Mahadevan
Pan-Genome-Scale Network Reconstruction: Harnessing Phylogenomics Increases the Quantity and Quality of Metabolic Models. Biotechnology journal 15 (10) (2020)
Christian Lieven, Moritz Emanuel Beber, Brett G Olivier, Frank T Bergmann, Meric Ataman, Parizad Babaei, Jennifer A Bartell, Lars M Blank, Siddharth Chauhan, Kevin Correia, Christian Diener, Andreas Dräger, Birgitta E Ebert, Janaka N Edirisinghe, José P Faria, Adam M Feist, Georgios Fengos, Ronan M T Fleming, Beatriz García-Jiménez, Vassily Hatzimanikatis, Wout van Helvoirt, Christopher S Henry, Henning Hermjakob, Markus J Herrgård, Ali Kaafarani, Hyun Uk Kim, Zachary A King, Steffen Klamt, Edda Klipp, Jasper J Koehorst, Matthias König, Meiyappan Lakshmanan, Dong-Yup Lee, Sang Yup Lee, Sunjae Lee, Nathan E Lewis, Filipe Liu, Hongwu Ma, Daniel Machado, Radhakrishnan Mahadevan, Paulo Maia, Adil Mardinglu, Gregory L Medlock, Jonathan M Monk, Jens B Nielsen, Lars Keld Nielsen, Juan Nogales, Intawat Nookaew, Bernhard O Palsson, Jason A Papin, Kiran Raosaheb Patil, Mark G Poolman, Nathan D Price, Osbaldo Resendis-Antonio, Anne Richelle, Isabel Rocha, Benjamín J Sánchez, Peter J Schaap, Rahuman S Malik Sheriff, Saeed Shoaie, Nikolaus Sonnenschein, Bas Teusink, Paulo Vilaça, Jon Olav Vik, Judith A H Wodke, Joana C Xavier, Qianqian Yuan, Maksim Zakhartsev, Cheng Zhang
MEMOTE for standardized genome-scale metabolic model testing. Nature biotechnology 38 (3) (2020)
Yilan Liu, Jinjin Chen, David Crisante, Jhoselyn Marisol Jaramillo Lopez, Radhakrishnan Mahadevan
Dynamic Cell Programming with Quorum Sensing-Controlled CRISPRi Circuit. ACS synthetic biology 9 (6) (2020)
Po-Hsiang Wang, Kevin Correia, Han-Chen Ho, Naveen Venayak, Kayla Nemr, Robert Flick, Radhakrishnan Mahadevan, Elizabeth A Edwards
An interspecies malate-pyruvate shuttle reconciles redox imbalance in an anaerobic microbial community. The ISME journal 13 (4) (2019)
Naveen Venayak, Kaushik Raj, Rohil Jaydeep, Radhakrishnan Mahadevan
Correction to An Optimized Bistable Metabolic Switch to Decouple Phenotypic States during Anaerobic Fermentation. ACS synthetic biology 8 (6) (2019)
Naveen Venayak, Kaushik Raj, Rohil Jaydeep, Radhakrishnan Mahadevan
An Optimized Bistable Metabolic Switch To Decouple Phenotypic States during Anaerobic Fermentation. ACS synthetic biology 7 (12) (2018)
Victor E Balderas-Hernández, Kevin Correia, Radhakrishnan Mahadevan
Inactivation of the transcription factor mig1 (YGL035C) in Saccharomyces cerevisiae improves tolerance towards monocarboxylic weak acids: acetic, formic and levulinic acid. Journal of industrial microbiology & biotechnology 45 (8) (2018)
Naveen Venayak, Axel von Kamp, Steffen Klamt, Radhakrishnan Mahadevan
MoVE identifies metabolic valves to switch between phenotypic states. Nature communications 9 (1) (2018)
Aditya Vikram Pandit, Shyam Srinivasan, Radhakrishnan Mahadevan
Redesigning metabolism based on orthogonality principles. Nature communications 8 (2017)
Po-Hsiang Wang, Shuiquan Tang, Kayla Nemr, Robert Flick, Jun Yan, Radhakrishnan Mahadevan, Alexander F Yakunin, Frank E Löffler, Elizabeth A Edwards
Refined experimental annotation reveals conserved corrinoid autotrophy in chloroform-respiring Dehalobacter isolates. The ISME journal 11 (3) (2016)