Adam M Feist

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 28

Top Topics

Escherichia Coli

Multidrug Resistant

High Efficiency

Saccharomyces Cerevisiae

Top Venues

Nature communications

Nature biotechnology

Proceedings of the National Academy of Sciences of the United States of America

This page only lists publications with an associated author ORCID identifier.

Publications

Han Sol Kim, Myung Hyun Noh, Evan M White, Michael V Kandefer, Austin F Wright, Debika Datta, Hyun Gyu Lim, Ethan Smiggs, Jason J Locklin, Md Arifur Rahman, Adam M Feist, Elizabathe Davis
Biocomposite thermoplastic polyurethanes containing evolved bacterial spores as living fillers to facilitate polymer disintegration. Nature communications 15 (1) (2024)
Han Sol Kim, Myung Hyun Noh, Evan M White, Michael V Kandefer, Austin F Wright, Debika Datta, Hyun Gyu Lim, Ethan Smiggs, Jason J Locklin, Md Arifur Rahman, Adam M Feist, Elizabathe Davis
Biocomposite thermoplastic polyurethanes containing evolved bacterial spores as living fillers to facilitate polymer disintegration. Nature communications 15 (1) (2024)
Donghui Choe, Connor A Olson, Richard Szubin, Hannah Yang, Jaemin Sung, Adam M Feist, Bernhard O Palsson
Advancing the scale of synthetic biology via cross-species transfer of cellular functions enabled by iModulon engraftment. Nature communications 15 (1) (2024)
Donghui Choe, Connor A Olson, Richard Szubin, Hannah Yang, Jaemin Sung, Adam M Feist, Bernhard O Palsson
Advancing the scale of synthetic biology via cross-species transfer of cellular functions enabled by iModulon engraftment. Nature communications 15 (1) (2024)
Han Sol Kim, Myung Hyun Noh, Evan M White, Michael V Kandefer, Austin F Wright, Debika Datta, Hyun Gyu Lim, Ethan Smiggs, Jason J Locklin, Md Arifur Rahman, Adam M Feist, Elizabathe Davis
Biocomposite thermoplastic polyurethanes containing evolved bacterial spores as living fillers to facilitate polymer disintegration. Nature communications 15 (1) (2024)
Donghui Choe, Connor A Olson, Richard Szubin, Hannah Yang, Jaemin Sung, Adam M Feist, Bernhard O Palsson
Advancing the scale of synthetic biology via cross-species transfer of cellular functions enabled by iModulon engraftment. Nature communications 15 (1) (2024)
Mohammad S Radi, Lachlan J Munro, Jesus Enrique Salcedo-Sora, Se Hyeuk Kim, Adam M Feist, Douglas B Kell
Understanding Functional Redundancy and Promiscuity of Multidrug Transporters in E. coli under Lipophilic Cation Stress. Membranes 12 (12) (2022)
Amitesh Anand, Arjun Patel, Ke Chen, Connor A Olson, Patrick V Phaneuf, Cameron Lamoureux, Ying Hefner, Richard Szubin, Adam M Feist, Bernhard O Palsson
Laboratory evolution of synthetic electron transport system variants reveals a larger metabolic respiratory system and its plasticity. Nature communications 13 (1) (2022)
Mohammad S Radi, Lachlan J Munro, Jesus Enrique Salcedo-Sora, Se Hyeuk Kim, Adam M Feist, Douglas B Kell
Understanding Functional Redundancy and Promiscuity of Multidrug Transporters in E. coli under Lipophilic Cation Stress. Membranes 12 (12) (2022)
Joshua Mueller, Howard Willett, Adam M Feist, Wei Niu
Engineering Pseudomonas putida for improved utilization of syringyl aromatics. Biotechnology and bioengineering 119 (9) (2022)
Jean-Christophe Lachance, Dominick Matteau, Joëlle Brodeur, Colton J Lloyd, Nathan Mih, Zachary A King, Thomas F Knight, Adam M Feist, Jonathan M Monk, Bernhard O Palsson, Pierre-Étienne Jacques, Sébastien Rodrigue
Genome-scale metabolic modeling reveals key features of a minimal gene set. Molecular systems biology 17 (7) (2022)
Mohammad S Radi, Lachlan J Munro, Jesus Enrique Salcedo-Sora, Se Hyeuk Kim, Adam M Feist, Douglas B Kell
Understanding Functional Redundancy and Promiscuity of Multidrug Transporters in E. coli under Lipophilic Cation Stress. Membranes 12 (12) (2022)
Mohammad S Radi, Lachlan J Munro, Jesus Enrique Salcedo-Sora, Se Hyeuk Kim, Adam M Feist, Douglas B Kell
Understanding Functional Redundancy and Promiscuity of Multidrug Transporters in E. coli under Lipophilic Cation Stress. Membranes 12 (12) (2022)
Patrick V Phaneuf, Daniel C Zielinski, James T Yurkovich, Josefin Johnsen, Richard Szubin, Lei Yang, Se Hyeuk Kim, Sebastian Schulz, Muyao Wu, Christopher Dalldorf, Emre Ozdemir, Rebecca M Lennen, Bernhard O Palsson, Adam M Feist
Escherichia coli Data-Driven Strain Design Using Aggregated Adaptive Laboratory Evolution Mutational Data. ACS synthetic biology (2021)
Henrique Machado, Yara Seif, George Sakoulas, Connor A Olson, Ying Hefner, Amitesh Anand, Ying Z Jones, Richard Szubin, Bernhard O Palsson, Victor Nizet, Adam M Feist
Environmental conditions dictate differential evolution of vancomycin resistance in Staphylococcus aureus. Communications biology 4 (1) (2021)
David Heckmann, Anaamika Campeau, Colton J Lloyd, Patrick V Phaneuf, Ying Hefner, Marvic Carrillo-Terrazas, Adam M Feist, David J Gonzalez, Bernhard O Palsson
Kinetic profiling of metabolic specialists demonstrates stability and consistency of in vivo enzyme turnover numbers. Proceedings of the National Academy of Sciences of the United States of America 117 (37) (2020)
Rui Pereira, Elsayed T Mohamed, Mohammad S Radi, Markus J Herrgård, Adam M Feist, Jens B Nielsen, Yun Chen
Elucidating aromatic acid tolerance at low pH in Saccharomyces cerevisiae using adaptive laboratory evolution. Proceedings of the National Academy of Sciences of the United States of America 117 (45) (2020)
Christian Lieven, Moritz Emanuel Beber, Brett G Olivier, Frank T Bergmann, Meric Ataman, Parizad Babaei, Jennifer A Bartell, Lars M Blank, Siddharth Chauhan, Kevin Correia, Christian Diener, Andreas Dräger, Birgitta E Ebert, Janaka N Edirisinghe, José P Faria, Adam M Feist, Georgios Fengos, Ronan M T Fleming, Beatriz García-Jiménez, Vassily Hatzimanikatis, Wout van Helvoirt, Christopher S Henry, Henning Hermjakob, Markus J Herrgård, Ali Kaafarani, Hyun Uk Kim, Zachary A King, Steffen Klamt, Edda Klipp, Jasper J Koehorst, Matthias König, Meiyappan Lakshmanan, Dong-Yup Lee, Sang Yup Lee, Sunjae Lee, Nathan E Lewis, Filipe Liu, Hongwu Ma, Daniel Machado, Radhakrishnan Mahadevan, Paulo Maia, Adil Mardinglu, Gregory L Medlock, Jonathan M Monk, Jens B Nielsen, Lars Keld Nielsen, Juan Nogales, Intawat Nookaew, Bernhard O Palsson, Jason A Papin, Kiran Raosaheb Patil, Mark G Poolman, Nathan D Price, Osbaldo Resendis-Antonio, Anne Richelle, Isabel Rocha, Benjamín J Sánchez, Peter J Schaap, Rahuman S Malik Sheriff, Saeed Shoaie, Nikolaus Sonnenschein, Bas Teusink, Paulo Vilaça, Jon Olav Vik, Judith A H Wodke, Joana C Xavier, Qianqian Yuan, Maksim Zakhartsev, Cheng Zhang
MEMOTE for standardized genome-scale metabolic model testing. Nature biotechnology 38 (3) (2020)
Michael J Salazar, Henrique Machado, Nicholas A Dillon, Hannah Tsunemoto, Richard Szubin, Samira Dahesh, Joseph Pogliano, George Sakoulas, Bernhard O Palsson, Victor Nizet, Adam M Feist
Genetic Determinants Enabling Medium-Dependent Adaptation to Nafcillin in Methicillin-Resistant Staphylococcus aureus. mSystems 5 (2) (2020)
Jean-Christophe Lachance, Colton J Lloyd, Jonathan M Monk, Laurence Yang, Anand V Sastry, Yara Seif, Bernhard O Palsson, Sébastien Rodrigue, Adam M Feist, Zachary A King, Pierre-Étienne Jacques
BOFdat: Generating biomass objective functions for genome-scale metabolic models from experimental data. PLoS computational biology 15 (4) (2019)
Gabriela I Guzmán, Troy E Sandberg, Ryan A LaCroix, Akos Nyerges, Henrietta Papp, Markus de Raad, Zachary A King, Ying Hefner, Trent R Northen, Richard A Notebaart, Csaba Pál, Bernhard O Palsson, Balázs Papp, Adam M Feist
Enzyme promiscuity shapes adaptation to novel growth substrates. Molecular systems biology 15 (4) (2019)
Saugat Poudel, Hannah Tsunemoto, Michael Meehan, Richard Szubin, Connor A Olson, Anne Lamsa, Yara Seif, Nicholas Dillon, Alison Vrbanac, Joseph Sugie, Samira Dahesh, Jonathan M Monk, Pieter C Dorrestein, Joseph Pogliano, Rob Knight, Victor Nizet, Bernhard O Palsson, Adam M Feist
Characterization of CA-MRSA TCH1516 exposed to nafcillin in bacteriological and physiological media. Scientific data 6 (1) (2019)
Elsayed T Mohamed, Hemanshu Mundhada, Jenny Landberg, Isaac Cann, Roderick I Mackie, Alex Toftgaard Nielsen, Markus J Herrgård, Adam M Feist
Generation of an E. coli platform strain for improved sucrose utilization using adaptive laboratory evolution. Microbial cell factories 18 (1) (2019)
Colton J Lloyd, Zachary A King, Troy E Sandberg, Ying Hefner, Connor A Olson, Patrick V Phaneuf, Edward J O'Brien, Jon G Sanders, Rodolfo A Salido, Karenina Sanders, Caitriona Brennan, Gregory Humphrey, Rob Knight, Adam M Feist
The genetic basis for adaptation of model-designed syntrophic co-cultures. PLoS computational biology 15 (3) (2019)
Jonathan M Monk, Colton J Lloyd, Elizabeth Brunk, Nathan Mih, Anand Sastry, Zachary A King, Rikiya Takeuchi, Wataru Nomura, Zhen Zhang, Hirotada Mori, Adam M Feist, Bernhard O Palsson
iML1515, a knowledgebase that computes Escherichia coli traits. Nature biotechnology 35 (10) (2019)
Amitesh Anand, Connor A Olson, Laurence Yang, Anand V Sastry, Edward Catoiu, Kumari Sonal Choudhary, Patrick V Phaneuf, Troy E Sandberg, Sibei Xu, Ying Hefner, Richard Szubin, Adam M Feist, Bernhard O Palsson
Pseudogene repair driven by selection pressure applied in experimental evolution. Nature microbiology 4 (3) (2019)
Douglas McCloskey, Sibei Xu, Troy E Sandberg, Elizabeth Brunk, Ying Hefner, Richard Szubin, Adam M Feist, Bernhard O Palsson
Evolution of gene knockout strains of E. coli reveal regulatory architectures governed by metabolism. Nature communications 9 (1) (2018)
Elsayed T Mohamed, Shizeng Wang, Rebecca M Lennen, Markus J Herrgård, Blake A Simmons, Steven W Singer, Adam M Feist
Generation of a platform strain for ionic liquid tolerance using adaptive laboratory evolution. Microbial cell factories 16 (1) (2017)