Daria Van Tyne

ORCID

Publication Activity (10 Years)

Years Active: 2020-2024
Publications (10 Years): 88

Top Venues

The Journal of infectious diseases

bioRxiv : the preprint server for biology

mBio

Nature communications

University of Pittsburgh

This page only lists publications with an associated author ORCID identifier.

Affiliation History

University of Pittsburgh

United States

Assistant Professor :: Medicine/Infectious Diseases

Publications

William G Bain, Brian Ahn, Hernán F Peñaloza, Christi L McElheny, Nathanial Tolman, Rick van der Geest, Shekina Gonzalez-Ferrer, Nathalie Chen, Xiaojing An, Ria Hosuru, Mohammadreza Tabary, Erin Papke, Naina Kohli, Nauman Farooq, William Bachman, Tolani F Olonisakin, Zeyu Xiong, Marissa P Griffith, Mara Sullivan, Jonathan Franks, Mustapha M Mustapha, Alina Iovleva, Tomeka Suber, Robert M Q Shanks, Viviana P Ferreira, Donna Beer Stolz, Daria Van Tyne, Yohei Doi, Janet S Lee
In Vivo Evolution of a Klebsiella pneumoniae Capsule Defect With wcaJ Mutation Promotes Complement-Mediated Opsonophagocytosis During Recurrent Infection. The Journal of infectious diseases 230 (1) (2024)
Georgios D Kitsios, Khaled Sayed, Adam Fitch, Haopu Yang, Noel Britton, Faraaz Shah, William G Bain, John W Evankovich, Shulin Qin, Xiaohong Wang, Kelvin Li, Asha Patel, Yingze Zhang, Josiah Radder, Charles Dela Cruz, Daniel A Okin, Ching-Ying Huang, Daria Van Tyne, Panayiotis V Benos, Barbara Methé, Peggy S Lai, Alison Morris, Bryan J McVerry
Longitudinal multicompartment characterization of host-microbiota interactions in patients with acute respiratory failure. Nature communications 15 (1) (2024)
Julia A Schwartzman, Francois Lebreton, Rauf Salamzade, Terrance Shea, Melissa J Martin, Katharina Schaufler, Aysun Urhan, Thomas Abeel, Ilana Lopes Baratella da Cunha Camargo, Bruna F Sgardioli, Janira Prichula, Ana Paula Guedes Frazzon, Gonzalo Giribet, Daria Van Tyne, Gregg Treinish, Charles J Innis, Jaap A Wagenaar, Ryan M Whipple, Abigail L Manson, Ashlee M Earl, Michael S Gilmore
Global diversity of enterococci and description of 18 previously unknown species. Proceedings of the National Academy of Sciences of the United States of America 121 (10) (2024)
William G Bain, Brian Ahn, Hernán F Peñaloza, Christi L McElheny, Nathanial Tolman, Rick van der Geest, Shekina Gonzalez-Ferrer, Nathalie Chen, Xiaojing An, Ria Hosuru, Mohammadreza Tabary, Erin Papke, Naina Kohli, Nauman Farooq, William Bachman, Tolani F Olonisakin, Zeyu Xiong, Marissa P Griffith, Mara Sullivan, Jonathan Franks, Mustapha M Mustapha, Alina Iovleva, Tomeka Suber, Robert M Q Shanks, Viviana P Ferreira, Donna Beer Stolz, Daria Van Tyne, Yohei Doi, Janet S Lee
In vivo evolution of a Klebsiella pneumoniae capsule defect with wcaJ mutation promotes complement-mediated opsono-phagocytosis during recurrent infection. The Journal of infectious diseases (2024)
Alexander J Sundermann, Marissa P Griffith, Vatsala Rangachar Srinivasa, Kady Waggle, Graham M Snyder, Daria Van Tyne, Lora Lee Pless, Lee H Harrison
Prolonged bacterial carriage and hospital transmission detected by whole genome sequencing surveillance. Antimicrobial stewardship & healthcare epidemiology : ASHE 4 (1) (2024)
Julia A Schwartzman, Francois Lebreton, Rauf Salamzade, Terrance Shea, Melissa J Martin, Katharina Schaufler, Aysun Urhan, Thomas Abeel, Ilana Lopes Baratella da Cunha Camargo, Bruna F Sgardioli, Janira Prichula, Ana Paula Guedes Frazzon, Gonzalo Giribet, Daria Van Tyne, Gregg Treinish, Charles J Innis, Jaap A Wagenaar, Ryan M Whipple, Abigail L Manson, Ashlee M Earl, Michael S Gilmore
Global diversity of enterococci and description of 18 previously unknown species. Proceedings of the National Academy of Sciences of the United States of America 121 (10) (2024)
William G Bain, Brian Ahn, Hernán F Peñaloza, Christi L McElheny, Nathanial Tolman, Rick van der Geest, Shekina Gonzalez-Ferrer, Nathalie Chen, Xiaojing An, Ria Hosuru, Mohammadreza Tabary, Erin Papke, Naina Kohli, Nauman Farooq, William Bachman, Tolani F Olonisakin, Zeyu Xiong, Marissa P Griffith, Mara Sullivan, Jonathan Franks, Mustapha M Mustapha, Alina Iovleva, Tomeka Suber, Robert M Q Shanks, Viviana P Ferreira, Donna Beer Stolz, Daria Van Tyne, Yohei Doi, Janet S Lee
In vivo evolution of a Klebsiella pneumoniae capsule defect with wcaJ mutation promotes complement-mediated opsono-phagocytosis during recurrent infection. The Journal of infectious diseases (2024)
Hayley R Nordstrom, Marissa P Griffith, Vatsala Rangachar Srinivasa, Nathan R Wallace, Anna Li, Vaughn S Cooper, Ryan K Shields, Daria Van Tyne
Harnessing the diversity of Burkholderia spp. prophages for therapeutic potential. bioRxiv : the preprint server for biology (2024)
Rito L Mikhari, Susan Meiring, Linda de Gouveia, Wai Yin Chan, Keith A Jolley, Daria Van Tyne, Lee H Harrison, Henju Marjuki, Arshad Ismail, Vanessa Quan, Cheryl Cohen, Sibongile Walaza, Anne von Gottberg, Mignon du Plessis
Genomic diversity and antimicrobial susceptibility of invasive Neisseria meningitidis in South Africa, 2016-2021. The Journal of infectious diseases (2024)
Paula F Zamora, Thomas G Reidy, Catherine R Armbruster, Ming Sun, Daria Van Tyne, Paul E Turner, Jonathan L Koff, Jennifer M Bomberger
Lytic bacteriophages interact with respiratory epithelial cells and induce the secretion of antiviral and proinflammatory cytokines. bioRxiv : the preprint server for biology (2024)
Shekina Gonzalez-Ferrer, Hernán F Peñaloza, Rick van der Geest, Zeyu Xiong, Atish Gheware, Mohammadreza Tabary, Megan Kochin, Kathryn Dalton, Henry Zou, Dequan Lou, Karina Lockwood, Yingze Zhang, William G Bain, Rama K Mallampalli, Anuradha Ray, Prabir Ray, Daria Van Tyne, Kong Chen, Janet S Lee
STAT1 Employs Myeloid Cell-Extrinsic Mechanisms to Regulate the Neutrophil Response and Provide Protection against Invasive Klebsiella pneumoniae Lung Infection. ImmunoHorizons 8 (1) (2024)
Kevin J Westbrook, Gayatri Shankar Chilambi, Madison E Stellfox, Hayley R Nordstrom, Yanhong Li, Alina Iovleva, Niyati H Shah, Chelsea E Jones, Ellen G Kline, Kevin M Squires, William R Miller, Truc T Tran, Cesar A Arias, Yohei Doi, Ryan K Shields, Daria Van Tyne
Differential in vitro susceptibility to ampicillin/ceftriaxone combination therapy among Enterococcus faecalis infective endocarditis clinical isolates. The Journal of antimicrobial chemotherapy 79 (4) (2024)
Paula F Zamora, Thomas G Reidy, Catherine R Armbruster, Ming Sun, Daria Van Tyne, Paul E Turner, Jonathan L Koff, Jennifer M Bomberger
Lytic bacteriophages interact with respiratory epithelial cells and induce the secretion of antiviral and proinflammatory cytokines. bioRxiv : the preprint server for biology (2024)
Shekina Gonzalez-Ferrer, Hernán F Peñaloza, Rick van der Geest, Zeyu Xiong, Atish Gheware, Mohammadreza Tabary, Megan Kochin, Kathryn Dalton, Henry Zou, Dequan Lou, Karina Lockwood, Yingze Zhang, William G Bain, Rama K Mallampalli, Anuradha Ray, Prabir Ray, Daria Van Tyne, Kong Chen, Janet S Lee
STAT1 Employs Myeloid Cell-Extrinsic Mechanisms to Regulate the Neutrophil Response and Provide Protection against Invasive Klebsiella pneumoniae Lung Infection. ImmunoHorizons 8 (1) (2024)
Alexander J Sundermann, Marissa P Griffith, Vatsala Rangachar Srinivasa, Kady Waggle, Graham M Snyder, Daria Van Tyne, Lora Lee Pless, Lee H Harrison
Prolonged bacterial carriage and hospital transmission detected by whole genome sequencing surveillance. Antimicrobial stewardship & healthcare epidemiology : ASHE 4 (1) (2024)
Georgios D Kitsios, Khaled Sayed, Adam Fitch, Haopu Yang, Noel Britton, Faraaz Shah, William G Bain, John W Evankovich, Shulin Qin, Xiaohong Wang, Kelvin Li, Asha Patel, Yingze Zhang, Josiah Radder, Charles Dela Cruz, Daniel A Okin, Ching-Ying Huang, Daria Van Tyne, Panayiotis V Benos, Barbara Methé, Peggy S Lai, Alison Morris, Bryan J McVerry
Longitudinal multicompartment characterization of host-microbiota interactions in patients with acute respiratory failure. Nature communications 15 (1) (2024)
William G Bain, Brian Ahn, Hernán F Peñaloza, Christi L McElheny, Nathanial Tolman, Rick van der Geest, Shekina Gonzalez-Ferrer, Nathalie Chen, Xiaojing An, Ria Hosuru, Mohammadreza Tabary, Erin Papke, Naina Kohli, Nauman Farooq, William Bachman, Tolani F Olonisakin, Zeyu Xiong, Marissa P Griffith, Mara Sullivan, Jonathan Franks, Mustapha M Mustapha, Alina Iovleva, Tomeka Suber, Robert M Q Shanks, Viviana P Ferreira, Donna Beer Stolz, Daria Van Tyne, Yohei Doi, Janet S Lee
In vivo evolution of a Klebsiella pneumoniae capsule defect with wcaJ mutation promotes complement-mediated opsono-phagocytosis during recurrent infection. The Journal of infectious diseases (2024)
Georgios D Kitsios, Khaled Sayed, Adam Fitch, Haopu Yang, Noel Britton, Faraaz Shah, William G Bain, John W Evankovich, Shulin Qin, Xiaohong Wang, Kelvin Li, Asha Patel, Yingze Zhang, Josiah Radder, Charles Dela Cruz, Daniel A Okin, Ching-Ying Huang, Daria Van Tyne, Panayiotis V Benos, Barbara Methé, Peggy S Lai, Alison Morris, Bryan J McVerry
Longitudinal multicompartment characterization of host-microbiota interactions in patients with acute respiratory failure. Nature communications 15 (1) (2024)
Kevin J Westbrook, Gayatri Shankar Chilambi, Madison E Stellfox, Hayley R Nordstrom, Yanhong Li, Alina Iovleva, Niyati H Shah, Chelsea E Jones, Ellen G Kline, Kevin M Squires, William R Miller, Truc T Tran, Cesar A Arias, Yohei Doi, Ryan K Shields, Daria Van Tyne
Differential in vitro susceptibility to ampicillin/ceftriaxone combination therapy among Enterococcus faecalis infective endocarditis clinical isolates. The Journal of antimicrobial chemotherapy 79 (4) (2024)
Shekina Gonzalez-Ferrer, Hernán F Peñaloza, Rick van der Geest, Zeyu Xiong, Atish Gheware, Mohammadreza Tabary, Megan Kochin, Kathryn Dalton, Henry Zou, Dequan Lou, Karina Lockwood, Yingze Zhang, William G Bain, Rama K Mallampalli, Anuradha Ray, Prabir Ray, Daria Van Tyne, Kong Chen, Janet S Lee
STAT1 Employs Myeloid Cell-Extrinsic Mechanisms to Regulate the Neutrophil Response and Provide Protection against Invasive Klebsiella pneumoniae Lung Infection. ImmunoHorizons 8 (1) (2024)
Hayley R Nordstrom, Marissa P Griffith, Vatsala Rangachar Srinivasa, Nathan R Wallace, Anna Li, Vaughn S Cooper, Ryan K Shields, Daria Van Tyne
Harnessing the diversity of Burkholderia spp. prophages for therapeutic potential. bioRxiv : the preprint server for biology (2024)
Adeline Supandy, Daria Van Tyne
AMPing up the Pressure: Cell envelope signaling protects Enterococcus faecalis from antimicrobial peptides. The Journal of infectious diseases (2024)
Georgios D Kitsios, Khaled Sayed, Adam Fitch, Haopu Yang, Noel Britton, Faraaz Shah, William G Bain, John W Evankovich, Shulin Qin, Xiaohong Wang, Kelvin Li, Asha Patel, Yingze Zhang, Josiah Radder, Charles Dela Cruz, Daniel A Okin, Ching-Ying Huang, Daria Van Tyne, Panayiotis V Benos, Barbara Methé, Peggy S Lai, Alison Morris, Bryan J McVerry
Longitudinal multicompartment characterization of host-microbiota interactions in patients with acute respiratory failure. Nature communications 15 (1) (2024)
Rito L Mikhari, Susan Meiring, Linda de Gouveia, Wai Yin Chan, Keith A Jolley, Daria Van Tyne, Lee H Harrison, Henju Marjuki, Arshad Ismail, Vanessa Quan, Cheryl Cohen, Sibongile Walaza, Anne von Gottberg, Mignon du Plessis
Genomic diversity and antimicrobial susceptibility of invasive Neisseria meningitidis in South Africa, 2016-2021. The Journal of infectious diseases (2024)
Ryan K Shields, Ava J Dorazio, Giusy Tiseo, Kevin M Squires, Alessandro Leonildi, Cesira Giordano, Ellen G Kline, Simona Barnini, Alina Iovleva, Marissa P Griffith, Daria Van Tyne, Yohei Doi, Marco Falcone
Frequency of cefiderocol heteroresistance among patients treated with cefiderocol for carbapenem-resistant Acinetobacter baumannii infections. JAC-antimicrobial resistance 6 (5) (2024)
Kevin J Westbrook, Gayatri Shankar Chilambi, Madison E Stellfox, Hayley R Nordstrom, Yanhong Li, Alina Iovleva, Niyati H Shah, Chelsea E Jones, Ellen G Kline, Kevin M Squires, William R Miller, Truc T Tran, Cesar A Arias, Yohei Doi, Ryan K Shields, Daria Van Tyne
Differential in vitro susceptibility to ampicillin/ceftriaxone combination therapy among Enterococcus faecalis infective endocarditis clinical isolates. The Journal of antimicrobial chemotherapy 79 (4) (2024)
Julia A Schwartzman, Francois Lebreton, Rauf Salamzade, Terrance Shea, Melissa J Martin, Katharina Schaufler, Aysun Urhan, Thomas Abeel, Ilana Lopes Baratella da Cunha Camargo, Bruna F Sgardioli, Janira Prichula, Ana Paula Guedes Frazzon, Gonzalo Giribet, Daria Van Tyne, Gregg Treinish, Charles J Innis, Jaap A Wagenaar, Ryan M Whipple, Abigail L Manson, Ashlee M Earl, Michael S Gilmore
Global diversity of enterococci and description of 18 previously unknown species. Proceedings of the National Academy of Sciences of the United States of America 121 (10) (2024)
Georgios D Kitsios, Khaled Sayed, Adam Fitch, Haopu Yang, Noel Britton, Faraaz Shah, William G Bain, John W Evankovich, Shulin Qin, Xiaohong Wang, Kelvin Li, Asha Patel, Yingze Zhang, Josiah Radder, Charles Dela Cruz, Daniel A Okin, Ching-Ying Huang, Daria Van Tyne, Panayiotis V Benos, Barbara Methé, Peggy S Lai, Alison Morris, Bryan J McVerry
Longitudinal multicompartment characterization of host-microbiota interactions in patients with acute respiratory failure. Nature communications 15 (1) (2024)
Emma G Mills, Alexander B Smith, Marissa P Griffith, Katharine Hewlett, Lora Pless, Alexander J Sundermann, Lee H Harrison, Joseph P Zackular, Daria Van Tyne
Bacteriocin production facilitates nosocomial emergence of vancomycin-resistant Enterococcus faecium . medRxiv : the preprint server for health sciences (2024)
William G Bain, Brian Ahn, Hernán F Peñaloza, Christi L McElheny, Nathanial Tolman, Rick van der Geest, Shekina Gonzalez-Ferrer, Nathalie Chen, Xiaojing An, Ria Hosuru, Mohammadreza Tabary, Erin Papke, Naina Kohli, Nauman Farooq, William Bachman, Tolani F Olonisakin, Zeyu Xiong, Marissa P Griffith, Mara Sullivan, Jonathan Franks, Mustapha M Mustapha, Alina Iovleva, Tomeka Suber, Robert M Q Shanks, Viviana P Ferreira, Donna Beer Stolz, Daria Van Tyne, Yohei Doi, Janet S Lee
In vivo evolution of a Klebsiella pneumoniae capsule defect with wcaJ mutation promotes complement-mediated opsono-phagocytosis during recurrent infection. The Journal of infectious diseases (2024)
Alexander J Sundermann, Marissa P Griffith, Vatsala Rangachar Srinivasa, Kady Waggle, Graham M Snyder, Daria Van Tyne, Lora Lee Pless, Lee H Harrison
Prolonged bacterial carriage and hospital transmission detected by whole genome sequencing surveillance. Antimicrobial stewardship & healthcare epidemiology : ASHE 4 (1) (2024)
Madison E Stellfox, Carolyn Fernandes, Ryan K Shields, Ghady Haidar, Kailey Hughes Kramer, Emily Dembinski, Mihnea R Mangalea, Garima Arya, Gregory S Canfield, Breck A Duerkop, Daria Van Tyne
Bacteriophage and antibiotic combination therapy for recurrent Enterococcus faecium bacteremia. mBio (2024)
Kevin J Westbrook, Gayatri Shankar Chilambi, Madison E Stellfox, Hayley R Nordstrom, Yanhong Li, Alina Iovleva, Niyati H Shah, Chelsea E Jones, Ellen G Kline, Kevin M Squires, William R Miller, Truc T Tran, Cesar A Arias, Yohei Doi, Ryan K Shields, Daria Van Tyne
Differential in vitro susceptibility to ampicillin/ceftriaxone combination therapy among Enterococcus faecalis infective endocarditis clinical isolates. The Journal of antimicrobial chemotherapy 79 (4) (2024)
William G Bain, Brian Ahn, Hernán F Peñaloza, Christi L McElheny, Nathanial Tolman, Rick van der Geest, Shekina Gonzalez-Ferrer, Nathalie Chen, Xiaojing An, Ria Hosuru, Mohammadreza Tabary, Erin Papke, Naina Kohli, Nauman Farooq, William Bachman, Tolani F Olonisakin, Zeyu Xiong, Marissa P Griffith, Mara Sullivan, Jonathan Franks, Mustapha M Mustapha, Alina Iovleva, Tomeka Suber, Robert M Q Shanks, Viviana P Ferreira, Donna Beer Stolz, Daria Van Tyne, Yohei Doi, Janet S Lee
In vivo evolution of a Klebsiella pneumoniae capsule defect with wcaJ mutation promotes complement-mediated opsono-phagocytosis during recurrent infection. The Journal of infectious diseases (2024)
William G Bain, Brian Ahn, Hernán F Peñaloza, Christi L McElheny, Nathanial Tolman, Rick van der Geest, Shekina Gonzalez-Ferrer, Nathalie Chen, Xiaojing An, Ria Hosuru, Mohammadreza Tabary, Erin Papke, Naina Kohli, Nauman Farooq, William Bachman, Tolani F Olonisakin, Zeyu Xiong, Marissa P Griffith, Mara Sullivan, Jonathan Franks, Mustapha M Mustapha, Alina Iovleva, Tomeka Suber, Robert M Q Shanks, Viviana P Ferreira, Donna Beer Stolz, Daria Van Tyne, Yohei Doi, Janet S Lee
In Vivo Evolution of a Klebsiella pneumoniae Capsule Defect With wcaJ Mutation Promotes Complement-Mediated Opsonophagocytosis During Recurrent Infection. The Journal of infectious diseases 230 (1) (2024)
Shekina Gonzalez-Ferrer, Hernán F Peñaloza, Rick van der Geest, Zeyu Xiong, Atish Gheware, Mohammadreza Tabary, Megan Kochin, Kathryn Dalton, Henry Zou, Dequan Lou, Karina Lockwood, Yingze Zhang, William G Bain, Rama K Mallampalli, Anuradha Ray, Prabir Ray, Daria Van Tyne, Kong Chen, Janet S Lee
STAT1 Employs Myeloid Cell-Extrinsic Mechanisms to Regulate the Neutrophil Response and Provide Protection against Invasive Klebsiella pneumoniae Lung Infection. ImmunoHorizons 8 (1) (2024)
Paula F Zamora, Thomas G Reidy, Catherine R Armbruster, Ming Sun, Daria Van Tyne, Paul E Turner, Jonathan L Koff, Jennifer M Bomberger
Lytic bacteriophages interact with respiratory epithelial cells and induce the secretion of antiviral and proinflammatory cytokines. bioRxiv : the preprint server for biology (2024)
Kevin J Westbrook, Gayatri Shankar Chilambi, Madison E Stellfox, Hayley R Nordstrom, Yanhong Li, Alina Iovleva, Niyati H Shah, Chelsea E Jones, Ellen G Kline, Kevin M Squires, William R Miller, Truc T Tran, Cesar A Arias, Yohei Doi, Ryan K Shields, Daria Van Tyne
Differential in vitro susceptibility to ampicillin/ceftriaxone combination therapy among Enterococcus faecalis infective endocarditis clinical isolates. The Journal of antimicrobial chemotherapy 79 (4) (2024)
Alexander J Sundermann, Vatsala Rangachar Srinivasa, Emma G Mills, Marissa P Griffith, Eric Evans, Jieshi Chen, Kady D Waggle, Graham M Snyder, Lora Lee Pless, Lee H Harrison, Daria Van Tyne
Genomic sequencing surveillance of patients colonized with vancomycin-resistant Enterococcus (VRE) improves detection of hospital-associated transmission. medRxiv : the preprint server for health sciences (2024)
Julia A Schwartzman, Francois Lebreton, Rauf Salamzade, Terrance Shea, Melissa J Martin, Katharina Schaufler, Aysun Urhan, Thomas Abeel, Ilana Lopes Baratella da Cunha Camargo, Bruna F Sgardioli, Janira Prichula, Ana Paula Guedes Frazzon, Gonzalo Giribet, Daria Van Tyne, Gregg Treinish, Charles J Innis, Jaap A Wagenaar, Ryan M Whipple, Abigail L Manson, Ashlee M Earl, Michael S Gilmore
Global diversity of enterococci and description of 18 previously unknown species. Proceedings of the National Academy of Sciences of the United States of America 121 (10) (2024)
William G Bain, Brian Ahn, Hernán F Peñaloza, Christi L McElheny, Nathanial Tolman, Rick van der Geest, Shekina Gonzalez-Ferrer, Nathalie Chen, Xiaojing An, Ria Hosuru, Mohammadreza Tabary, Erin Papke, Naina Kohli, Nauman Farooq, William Bachman, Tolani F Olonisakin, Zeyu Xiong, Marissa P Griffith, Mara Sullivan, Jonathan Franks, Mustapha M Mustapha, Alina Iovleva, Tomeka Suber, Robert M Q Shanks, Viviana P Ferreira, Donna Beer Stolz, Daria Van Tyne, Yohei Doi, Janet S Lee
In Vivo Evolution of a Klebsiella pneumoniae Capsule Defect With wcaJ Mutation Promotes Complement-Mediated Opsonophagocytosis During Recurrent Infection. The Journal of infectious diseases 230 (1) (2024)
Julia A Schwartzman, Francois Lebreton, Rauf Salamzade, Terrance Shea, Melissa J Martin, Katharina Schaufler, Aysun Urhan, Thomas Abeel, Ilana Lopes Baratella da Cunha Camargo, Bruna F Sgardioli, Janira Prichula, Ana Paula Guedes Frazzon, Gonzalo Giribet, Daria Van Tyne, Gregg Treinish, Charles J Innis, Jaap A Wagenaar, Ryan M Whipple, Abigail L Manson, Ashlee M Earl, Michael S Gilmore
Global diversity of enterococci and description of 18 previously unknown species. Proceedings of the National Academy of Sciences of the United States of America 121 (10) (2024)
Madison E Stellfox, Carolyn Fernandes, Ryan K Shields, Ghady Haidar, Kailey Hughes Kramer, Emily Dembinski, Mihnea R Mangalea, Garima Arya, Gregory S Canfield, Breck A Duerkop, Daria Van Tyne
Bacteriophage and antibiotic combination therapy for recurrent Enterococcus faecium bacteremia. mBio 15 (3) (2024)
Emma G Mills, Alexander B Smith, Marissa P Griffith, Katharine Hewlett, Lora Pless, Alexander J Sundermann, Lee H Harrison, Joseph P Zackular, Daria Van Tyne
Bacteriocin production facilitates nosocomial emergence of vancomycin-resistant Enterococcus faecium . medRxiv : the preprint server for health sciences (2024)
Madison E Stellfox, Carolyn Fernandes, Ryan K Shields, Ghady Haidar, Kailey Hughes Kramer, Emily Dembinski, Mihnea R Mangalea, Garima Arya, Gregory S Canfield, Breck A Duerkop, Daria Van Tyne
Bacteriophage and antibiotic combination therapy for recurrent Enterococcus faecium bacteremia. mBio 15 (3) (2024)
William G Bain, Brian Ahn, Hernán F Peñaloza, Christi L McElheny, Nathanial Tolman, Rick van der Geest, Shekina Gonzalez-Ferrer, Nathalie Chen, Xiaojing An, Ria Hosuru, Mohammadreza Tabary, Erin Papke, Naina Kohli, Nauman Farooq, William Bachman, Tolani F Olonisakin, Zeyu Xiong, Marissa P Griffith, Mara Sullivan, Jonathan Franks, Mustapha M Mustapha, Alina Iovleva, Tomeka Suber, Robert M Q Shanks, Viviana P Ferreira, Donna Beer Stolz, Daria Van Tyne, Yohei Doi, Janet S Lee
In Vivo Evolution of a Klebsiella pneumoniae Capsule Defect With wcaJ Mutation Promotes Complement-Mediated Opsonophagocytosis During Recurrent Infection. The Journal of infectious diseases 230 (1) (2024)
Madison E Stellfox, Carolyn Fernandes, Ryan K Shields, Ghady Haidar, Kailey Hughes Kramer, Emily Dembinski, Mihnea R Mangalea, Garima Arya, Gregory S Canfield, Breck A Duerkop, Daria Van Tyne
Bacteriophage and antibiotic combination therapy for recurrent Enterococcus faecium bacteremia. mBio 15 (3) (2024)
William G Bain, Brian Ahn, Hernán F Peñaloza, Christi L McElheny, Nathanial Tolman, Rick van der Geest, Shekina Gonzalez-Ferrer, Nathalie Chen, Xiaojing An, Ria Hosuru, Mohammadreza Tabary, Erin Papke, Naina Kohli, Nauman Farooq, William Bachman, Tolani F Olonisakin, Zeyu Xiong, Marissa P Griffith, Mara Sullivan, Jonathan Franks, Mustapha M Mustapha, Alina Iovleva, Tomeka Suber, Robert M Q Shanks, Viviana P Ferreira, Donna Beer Stolz, Daria Van Tyne, Yohei Doi, Janet S Lee
In vivo evolution of a Klebsiella pneumoniae capsule defect with wcaJ mutation promotes complement-mediated opsono-phagocytosis during recurrent infection. The Journal of infectious diseases (2024)
Shekina Gonzalez-Ferrer, Hernán F Peñaloza, Rick van der Geest, Zeyu Xiong, Atish Gheware, Mohammadreza Tabary, Megan Kochin, Kathryn Dalton, Henry Zou, Dequan Lou, Karina Lockwood, Yingze Zhang, William G Bain, Rama K Mallampalli, Anuradha Ray, Prabir Ray, Daria Van Tyne, Kong Chen, Janet S Lee
STAT1 Employs Myeloid Cell-Extrinsic Mechanisms to Regulate the Neutrophil Response and Provide Protection against Invasive Klebsiella pneumoniae Lung Infection. ImmunoHorizons 8 (1) (2024)
Emma G Mills, Alexander B Smith, Marissa P Griffith, Katharine Hewlett, Lora Pless, Alexander J Sundermann, Lee H Harrison, Joseph P Zackular, Daria Van Tyne
Bacteriocin production facilitates nosocomial emergence of vancomycin-resistant Enterococcus faecium . medRxiv : the preprint server for health sciences (2024)
Hayley R Nordstrom, Marissa P Griffith, Vatsala Rangachar Srinivasa, Nathan R Wallace, Anna Li, Vaughn S Cooper, Ryan K Shields, Daria Van Tyne
Harnessing the diversity of Burkholderia spp. prophages for therapeutic potential. bioRxiv : the preprint server for biology (2024)
Georgios D Kitsios, Khaled Sayed, Adam Fitch, Haopu Yang, Noel Britton, Faraaz Shah, William G Bain, John W Evankovich, Shulin Qin, Xiaohong Wang, Kelvin Li, Asha Patel, Yingze Zhang, Josiah Radder, Charles Dela Cruz, Daniel A Okin, Ching-Ying Huang, Daria Van Tyne, Panayiotis V Benos, Barbara Methé, Peggy S Lai, Alison Morris, Bryan J McVerry
Longitudinal multicompartment characterization of host-microbiota interactions in patients with acute respiratory failure. Nature communications 15 (1) (2024)
Kevin J Westbrook, Gayatri Shankar Chilambi, Madison E Stellfox, Hayley R Nordstrom, Yanhong Li, Alina Iovleva, Niyati H Shah, Chelsea E Jones, Ellen G Kline, Kevin M Squires, William R Miller, Truc T Tran, Cesar A Arias, Yohei Doi, Ryan K Shields, Daria Van Tyne
Differential in vitro susceptibility to ampicillin/ceftriaxone combination therapy among Enterococcus faecalis infective endocarditis clinical isolates. The Journal of antimicrobial chemotherapy (2024)
Hayley R Nordstrom, Marissa P Griffith, Vatsala Rangachar Srinivasa, Nathan R Wallace, Anna Li, Vaughn S Cooper, Ryan K Shields, Daria Van Tyne
Harnessing the diversity of Burkholderia spp. prophages for therapeutic potential. bioRxiv : the preprint server for biology (2024)
Cristian V Crisan, Rebecca P Duncan, Daria Van Tyne, Joanna B Goldberg
Complete genome sequence of Stenotrophomonas maltophilia complex strain STEN00241. Microbiology resource announcements (2023)
Gayatri Shankar Chilambi, Yu-Hao Wang, Nathan R Wallace, Chetachukwu Obiwuma, Kirsten M Evans, Yanhong Li, Menna-Allah W Shalaby, Daniel P Flaherty, Ryan K Shields, Yohei Doi, Daria Van Tyne
Carbonic Anhydrase Inhibition as a Target for Antibiotic Synergy in Enterococci. Microbiology spectrum (2023)
Shu-Ting Cho, Emma G Mills, Marissa P Griffith, Hayley R Nordstrom, Christi L McElheny, Lee H Harrison, Yohei Doi, Daria Van Tyne
Evolution of extended-spectrum β-lactamase-producing ST131 Escherichia coli at a single hospital over 15 years. bioRxiv : the preprint server for biology (2023)
Alexander J Sundermann, Marissa Griffith, Vatsala Rangachar Srinivasa, Deena Ereifej, Kady Waggle, Daria Van Tyne, Graham M Snyder, A William Pasculle, Tanner Bartholow, Lora Pless, Lee H Harrison
Environmental contamination of postmortem blood cultures detected by whole-genome sequencing surveillance. Infection control and hospital epidemiology (2023)
Shu-Ting Cho, Emma G Mills, Marissa P Griffith, Hayley R Nordstrom, Christi L McElheny, Lee H Harrison, Yohei Doi, Daria Van Tyne
Evolution of extended-spectrum β-lactamase-producing ST131 Escherichia coli at a single hospital over 15 years. bioRxiv : the preprint server for biology (2023)
Ghady Haidar, Benjamin K Chan, Shu-Ting Cho, Kailey Hughes Kramer, Hayley R Nordstrom, Nathan R Wallace, Madison E Stellfox, Mische Holland, Ellen G Kline, Jennifer M Kozar, Silpa D Kilaru, Joseph M Pilewski, John J LiPuma, Vaughn S Cooper, Ryan K Shields, Daria Van Tyne
Phage therapy in a lung transplant recipient with cystic fibrosis infected with multidrug-resistant Burkholderia multivorans. Transplant infectious disease : an official journal of the Transplantation Society (2023)
Alexander B Smith, Jonathan T Specker, Katharine K Hewlett, Troy R Scoggins, Montana Knight, Abigail M Lustig, Yanhong Li, Kirsten M Evans, Yingchan Guo, Qianxuan She, Michael W Christopher, Timothy J Garrett, Ahmed M Moustafa, Daria Van Tyne, Boone M Prentice, Joseph P Zackular
Liberation of host heme by Clostridioides difficile- mediated damage enhances Enterococcus faecalis fitness during infection. mBio (2023)
Ryan K Shields, Ellen G Kline, Kevin M Squires, Daria Van Tyne, Yohei Doi
In vitro activity of cefiderocol against Pseudomonas aeruginosa demonstrating evolved resistance to novel β-lactam/β-lactamase inhibitors. JAC-antimicrobial resistance 5 (5) (2023)
Shu-Ting Cho, Emma G Mills, Marissa P Griffith, Hayley R Nordstrom, Christi L McElheny, Lee H Harrison, Yohei Doi, Daria Van Tyne
Evolution of extended-spectrum β-lactamase-producing ST131 Escherichia coli at a single hospital over 15 years. bioRxiv : the preprint server for biology (2023)
Cristian V Crisan, Rebecca P Duncan, Daria Van Tyne, Joanna B Goldberg
Complete genome sequence of Stenotrophomonas maltophilia complex strain STEN00241. Microbiology resource announcements 13 (2) (2023)
Shu-Ting Cho, Emma G Mills, Marissa P Griffith, Hayley R Nordstrom, Christi L McElheny, Lee H Harrison, Yohei Doi, Daria Van Tyne
Evolution of extended-spectrum β-lactamase-producing ST131 Escherichia coli at a single hospital over 15 years. bioRxiv : the preprint server for biology (2023)
Cristian V Crisan, Daria Van Tyne, Joanna B Goldberg
The type VI secretion system of the emerging pathogen Stenotrophomonas maltophilia complex has antibacterial properties. mSphere (2023)
Cristian V Crisan, Daria Van Tyne, Joanna B Goldberg
The Type VI Secretion System of the Emerging Pathogen Stenotrophomonas maltophilia has Antibacterial Properties. bioRxiv : the preprint server for biology (2023)
Shu-Ting Cho, Emma G Mills, Marissa P Griffith, Hayley R Nordstrom, Christi L McElheny, Lee H Harrison, Yohei Doi, Daria Van Tyne
Evolution of extended-spectrum β-lactamase-producing ST131 Escherichia coli at a single hospital over 15 years. bioRxiv : the preprint server for biology (2023)
Cristian V Crisan, Rebecca P Duncan, Daria Van Tyne, Joanna B Goldberg
Complete genome sequence of Stenotrophomonas maltophilia complex strain STEN00241. Microbiology resource announcements 13 (2) (2023)
Alexander J Sundermann, Vatsala Rangachar Srinivasa, Emma G Mills, Marissa P Griffith, Kady D Waggle, Ashley M Ayres, Lora Pless, Graham M Snyder, Lee H Harrison, Daria Van Tyne
Two Artificial Tears Outbreak-Associated Cases of Extensively Drug-Resistant Pseudomonas aeruginosa Detected Through Whole Genome Sequencing-Based Surveillance. The Journal of infectious diseases (2023)
Georgios D Kitsios, Khaled Sayed, Adam Fitch, Haopu Yang, Noel Britton, Faraaz Shah, William G Bain, John Evankovich, Shulin Qin, Xiaohong Wang, Kelvin Li, Asha Patel, Yingze Zhang, Josiah Radder, Charles Dela Cruz, Daniel Okin, Ching-Ying Huang, Daria Van Tyne, Panayiotis Benos, Barbara Methe, Peggy Lai, Alison Morris, Bryan J McVerry
Prognostic Insights from Longitudinal Multicompartment Study of Host-Microbiota Interactions in Critically Ill Patients. Research square (2023)
Cristian V Crisan, Rebecca P Duncan, Daria Van Tyne, Joanna B Goldberg
Complete genome sequence of Stenotrophomonas maltophilia complex strain STEN00241. Microbiology resource announcements 13 (2) (2023)
Lei Zhu, Jane W Marsh, Marissa P Griffith, Kevin Collins, Vatsala Srinivasa, Kady Waggle, Daria Van Tyne, Graham M Snyder, Tung Phan, Alan Wells, Oscar C Marroquin, Lee H Harrison
Predictive model for severe COVID-19 using SARS-CoV-2 whole-genome sequencing and electronic health record data, March 2020-May 2021. PloS one 17 (7) (2022)
Alina Iovleva, Mustapha M Mustapha, Marissa P Griffith, Lauren Komarow, Courtney Luterbach, Daniel R Evans, Eric Cober, Sandra S Richter, Kirsten Rydell, Cesar A Arias, Lindsey B Gottlieb, Robert A Salata, Michael J Satlin, Darren Wong, Robert A Bonomo, David Van Duin, Vaughn S Cooper, Daria Van Tyne, Yohei Doi
Carbapenem-Resistant Acinetobacter baumannii in U.S. Hospitals: Diversification of Circulating Lineages and Antimicrobial Resistance. mBio 13 (2) (2022)
Gina A Suh, Thomas P Lodise, Pranita D Tamma, Jane M Knisely, Jose Alexander, Saima Aslam, Karen D Barton, Erica Bizzell, Katherine M C Totten, Joseph L Campbell, Benjamin K Chan, Scott A Cunningham, Katherine E Goodman, Kerryl E Greenwood-Quaintance, Anthony D Harris, Shayla E Hesse, Anthony Maresso, Veronique Nussenblatt, David T Pride, Michael Joseph Rybak, Zoe Sund, David Van Duin, Daria Van Tyne, Robin Patel, null null
Considerations for the Use of Phage Therapy in Clinical Practice. Antimicrobial agents and chemotherapy 66 (3) (2022)
Amanda G Finney, Jalyne M Perry, Daniel R Evans, Kevin J Westbrook, Christi L McElheny, Alina Iovleva, Yohei Doi, Ryan K Shields, Daria Van Tyne
Isolation and Characterization of Lytic Bacteriophages Targeting Diverse Enterobacter spp. Clinical Isolates. PHAGE (New Rochelle, N.Y.) 3 (1) (2022)
Alexander B Smith, Matthew L Jenior, Orlaith Keenan, Jessica L Hart, Jonathan T Specker, Arwa Abbas, Paula C Rangel, Chao Di, Jamal Green, Katelyn A Bustin, Jennifer A Gaddy, Maribeth R Nicholson, Clare Laut, Brendan J Kelly, Megan L Matthews, Daniel R Evans, Daria Van Tyne, Emma E Furth, Jason A Papin, Frederic D Bushman, Jessi Erlichman, Robert N Baldassano, Michael A Silverman, Gary M Dunny, Boone M Prentice, Eric P Skaar, Joseph P Zackular
Enterococci enhance Clostridioides difficile pathogenesis. Nature 611 (7937) (2022)
Alexander J Sundermann, Jieshi Chen, James Kyle Miller, Elise M Martin, Graham M Snyder, Daria Van Tyne, Jane W Marsh, Artur W Dubrawski, Lee H Harrison
Whole-genome sequencing surveillance and machine learning for healthcare outbreak detection and investigation: A systematic review and summary. Antimicrobial stewardship & healthcare epidemiology : ASHE 2 (1) (2022)
Madison E Stellfox, Daria Van Tyne
Last Bacteria Standing: VREfm Persistence in the Hospitalized Gut. mBio 13 (4) (2022)
Mustapha M Mustapha, Vatsala R Srinivasa, Marissa P Griffith, Shu-Ting Cho, Daniel R Evans, Kady Waggle, Chinelo Ezeonwuka, Daniel J Snyder, Jane W Marsh, Lee H Harrison, Vaughn S Cooper, Daria Van Tyne
Genomic Diversity of Hospital-Acquired Infections Revealed through Prospective Whole-Genome Sequencing-Based Surveillance. mSystems 7 (3) (2022)
Shekina Gonzalez-Ferrer, Hernán F Peñaloza, James A Budnick, William G Bain, Hayley R Nordstrom, Janet S Lee, Daria Van Tyne
Finding Order in the Chaos: Outstanding Questions in Klebsiella pneumoniae Pathogenesis. Infection and immunity 89 (4) (2021)
Abigail M Rubio, Ellen G Kline, Chelsea E Jones, Liang Chen, Barry N Kreiswirth, M Hong Nguyen, Cornelius J Clancy, Vaughn S Cooper, Ghady Haidar, Daria Van Tyne, Ryan K Shields
In Vitro Susceptibility of Multidrug-Resistant Pseudomonas aeruginosa following Treatment-Emergent Resistance to Ceftolozane-Tazobactam. Antimicrobial agents and chemotherapy 65 (6) (2021)
Gayatri Shankar Chilambi, Hayley R Nordstrom, Daniel R Evans, Regis P Kowalski, Deepinder K Dhaliwal, Vishal Jhanji, Robert M Q Shanks, Daria Van Tyne
Genomic and phenotypic diversity of Enterococcus faecalis isolated from endophthalmitis. PloS one 16 (4) (2021)
Ahmed Babiker, Daniel R Evans, Marissa P Griffith, Christi L McElheny, Mohamed Hassan, Lloyd G Clarke, Roberta T Mettus, Lee H Harrison, Yohei Doi, Ryan K Shields, Daria Van Tyne
Clinical and Genomic Epidemiology of Carbapenem-Nonsusceptible Citrobacter spp. at a Tertiary Health Care Center over 2 Decades. Journal of clinical microbiology 58 (9) (2020)
Gayatri Shankar Chilambi, Hayley R Nordstrom, Daniel R Evans, Jose A Ferrolino, Randall T Hayden, Gabriela M Marón, Anh N Vo, Michael S Gilmore, Joshua Wolf, Jason W Rosch, Daria Van Tyne
Evolution of vancomycin-resistant Enterococcus faecium during colonization and infection in immunocompromised pediatric patients. Proceedings of the National Academy of Sciences of the United States of America 117 (21) (2020)
Daniel R Evans, Marissa P Griffith, Alexander J Sundermann, Kathleen A Shutt, Melissa I Saul, Mustapha M Mustapha, Jane W Marsh, Vaughn S Cooper, Lee H Harrison, Daria Van Tyne
Systematic detection of horizontal gene transfer across genera among multidrug-resistant bacteria in a single hospital. eLife 9 (2020)
Janira Prichula, Daria Van Tyne, Julia Schwartzman, Fernando Hayashi Sant'Anna, Rebeca Inhoque Pereira, Gabriela Rosa da Cunha, Maurício Tavares, François Lebreton, Jeverson Frazzon, Pedro Alves d'Azevedo, Adriana Seixas, Ana Paula Guedes Frazzon, Michael S Gilmore
Enterococci from Wild Magellanic Penguins (Spheniscus magellanicus) as an Indicator of Marine Ecosystem Health and Human Impact. Applied and environmental microbiology 86 (19) (2020)
Daria Van Tyne, Abigail L Manson, Mark M Huycke, John Karanicolas, Ashlee M Earl, Michael S Gilmore
Impact of antibiotic treatment and host innate immune pressure on enterococcal adaptation in the human bloodstream. Science translational medicine 11 (487) (2020)

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Daria Van Tyne