Noah F Greenwald (N F Greenwald, Noah Greenwald)

ORCID

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 26

Top Venues

Nature methods

Nature communications

Science (New York, N.Y.)

Nature biotechnology

Stanford University (PHD)

This page only lists publications with an associated author ORCID identifier.

Education History

Stanford University Sep 15 2017

United States

PHD :: Biosciences

Publications

Jun Ma, Ronald Xie, Shamini Ayyadhury, Cheng Ge, Anubha Gupta, Ritu Gupta, Song Gu, Yao Zhang, Gihun Lee, Joonkee Kim, Wei Lou, Hao-Feng Li, Eric Upschulte, Timo Dickscheid, José Guilherme de Almeida, Yixin Wang, Lin Han, Xin Yang, Marco Labagnara, Vojislav Gligorovski, Maxime Scheder, Sahand Jamal Rahi, Carly Kempster, Alice Y Pollitt, Leon Espinosa, Tâm Mignot, Jan Moritz Middeke, Jan-Niklas Eckardt, Wangkai Li, Zhaoyang Li, Xiaochen Cai, Bizhe Bai, Noah F Greenwald, David Van Valen, Erin Weisbart, Beth A Cimini, Trevor Cheung, Oscar Brück, Gary D Baider, Bo Wang
The multimodality cell segmentation challenge: toward universal solutions. Nature methods 21 (6) (2024)
J Lorenz Rumberger, Noah F Greenwald, Jolene S Ranek, Potchara Boonrat, Cameron Walker, Jannik Franzen, Sricharan Reddy Varra, Alex Kong, Cameron Sowers, Candace C Liu, Inna Averbukh, Hadeesha Piyadasa, Rami Vanguri, Iris Nederlof, Xuefei Julie Wang, David Van Valen, Marleen Kok, Travis J Hollmann, Dagmar Kainmueller, R Michael Angelo
Automated classification of cellular expression in multiplexed imaging data with Nimbus. bioRxiv : the preprint server for biology (2024)
Kathleen E Houlahan, Aziz Khan, Noah F Greenwald, Cristina Sotomayor Vivas, Robert B West, R Michael Angelo, Christina Curtis
Germline-mediated immunoediting sculpts breast cancer subtypes and metastatic proclivity. Science (New York, N.Y.) 384 (6699) (2024)
Jun Ma, Ronald Xie, Shamini Ayyadhury, Cheng Ge, Anubha Gupta, Ritu Gupta, Song Gu, Yao Zhang, Gihun Lee, Joonkee Kim, Wei Lou, Hao-Feng Li, Eric Upschulte, Timo Dickscheid, José Guilherme de Almeida, Yixin Wang, Lin Han, Xin Yang, Marco Labagnara, Vojislav Gligorovski, Maxime Scheder, Sahand Jamal Rahi, Carly Kempster, Alice Y Pollitt, Leon Espinosa, Tâm Mignot, Jan Moritz Middeke, Jan-Niklas Eckardt, Wangkai Li, Zhaoyang Li, Xiaochen Cai, Bizhe Bai, Noah F Greenwald, David Van Valen, Erin Weisbart, Beth A Cimini, Trevor Cheung, Oscar Brück, Gary D Baider, Bo Wang
The multimodality cell segmentation challenge: toward universal solutions. Nature methods 21 (6) (2024)
Kathleen E Houlahan, Aziz Khan, Noah F Greenwald, Cristina Sotomayor Vivas, Robert B West, R Michael Angelo, Christina Curtis
Germline-mediated immunoediting sculpts breast cancer subtypes and metastatic proclivity. Science (New York, N.Y.) 384 (6699) (2024)
Jun Ma, Ronald Xie, Shamini Ayyadhury, Cheng Ge, Anubha Gupta, Ritu Gupta, Song Gu, Yao Zhang, Gihun Lee, Joonkee Kim, Wei Lou, Hao-Feng Li, Eric Upschulte, Timo Dickscheid, José Guilherme de Almeida, Yixin Wang, Lin Han, Xin Yang, Marco Labagnara, Vojislav Gligorovski, Maxime Scheder, Sahand Jamal Rahi, Carly Kempster, Alice Y Pollitt, Leon Espinosa, Tâm Mignot, Jan Moritz Middeke, Jan-Niklas Eckardt, Wangkai Li, Zhaoyang Li, Xiaochen Cai, Bizhe Bai, Noah F Greenwald, David Van Valen, Erin Weisbart, Beth A Cimini, Trevor Cheung, Oscar Brück, Gary D Baider, Bo Wang
The multimodality cell segmentation challenge: toward universal solutions. Nature methods 21 (6) (2024)
Jun Ma, Ronald Xie, Shamini Ayyadhury, Cheng Ge, Anubha Gupta, Ritu Gupta, Song Gu, Yao Zhang, Gihun Lee, Joonkee Kim, Wei Lou, Hao-Feng Li, Eric Upschulte, Timo Dickscheid, José Guilherme de Almeida, Yixin Wang, Lin Han, Xin Yang, Marco Labagnara, Vojislav Gligorovski, Maxime Scheder, Sahand Jamal Rahi, Carly Kempster, Alice Y Pollitt, Leon Espinosa, Tâm Mignot, Jan Moritz Middeke, Jan-Niklas Eckardt, Wangkai Li, Zhaoyang Li, Xiaochen Cai, Bizhe Bai, Noah F Greenwald, David Van Valen, Erin Weisbart, Beth A Cimini, Trevor Cheung, Oscar Brück, Gary D Baider, Bo Wang
The multimodality cell segmentation challenge: toward universal solutions. Nature methods (2024)
Jun Ma, Ronald Xie, Shamini Ayyadhury, Cheng Ge, Anubha Gupta, Ritu Gupta, Song Gu, Yao Zhang, Gihun Lee, Joonkee Kim, Wei Lou, Hao-Feng Li, Eric Upschulte, Timo Dickscheid, José Guilherme de Almeida, Yixin Wang, Lin Han, Xin Yang, Marco Labagnara, Vojislav Gligorovski, Maxime Scheder, Sahand Jamal Rahi, Carly Kempster, Alice Y Pollitt, Leon Espinosa, Tâm Mignot, Jan Moritz Middeke, Jan-Niklas Eckardt, Wangkai Li, Zhaoyang Li, Xiaochen Cai, Bizhe Bai, Noah F Greenwald, David Van Valen, Erin Weisbart, Beth A Cimini, Trevor Cheung, Oscar Brück, Gary D Baider, Bo Wang
The multimodality cell segmentation challenge: toward universal solutions. Nature methods (2024)
Jun Ma, Ronald Xie, Shamini Ayyadhury, Cheng Ge, Anubha Gupta, Ritu Gupta, Song Gu, Yao Zhang, Gihun Lee, Joonkee Kim, Wei Lou, Hao-Feng Li, Eric Upschulte, Timo Dickscheid, José Guilherme de Almeida, Yixin Wang, Lin Han, Xin Yang, Marco Labagnara, Vojislav Gligorovski, Maxime Scheder, Sahand Jamal Rahi, Carly Kempster, Alice Y Pollitt, Leon Espinosa, Tâm Mignot, Jan Moritz Middeke, Jan-Niklas Eckardt, Wangkai Li, Zhaoyang Li, Xiaochen Cai, Bizhe Bai, Noah F Greenwald, David Van Valen, Erin Weisbart, Beth A Cimini, Trevor Cheung, Oscar Brück, Gary D Baider, Bo Wang
The multimodality cell segmentation challenge: toward universal solutions. Nature methods (2024)
J Lorenz Rumberger, Noah F Greenwald, Jolene S Ranek, Potchara Boonrat, Cameron Walker, Jannik Franzen, Sricharan Reddy Varra, Alex Kong, Cameron Sowers, Candace C Liu, Inna Averbukh, Hadeesha Piyadasa, Rami Vanguri, Iris Nederlof, Xuefei Julie Wang, David Van Valen, Marleen Kok, Travis J Hollmann, Dagmar Kainmueller, R Michael Angelo
Automated classification of cellular expression in multiplexed imaging data with Nimbus. bioRxiv : the preprint server for biology (2024)
Kathleen E Houlahan, Aziz Khan, Noah F Greenwald, Cristina Sotomayor Vivas, Robert B West, R Michael Angelo, Christina Curtis
Germline-mediated immunoediting sculpts breast cancer subtypes and metastatic proclivity. Science (New York, N.Y.) 384 (6699) (2024)
Shirley Greenbaum, Inna Averbukh, Erin Soon, Gabrielle Rizzuto, Alex Baranski, Noah F Greenwald, Adam Kagel, Marc Bosse, Eleni G Jaswa, Zumana Khair, Shirley Kwok, Shiri Warshawsky, Hadeesha Piyadasa, Mako Goldston, Angie Spence, Geneva Miller, Morgan S Schwartz, William Graf, David Van Valen, Virginia D Winn, Travis Hollmann, Leeat Keren, Matt van de Rijn, R Michael Angelo
A spatially resolved timeline of the human maternal-fetal interface. Nature 619 (7970) (2023)
Candace C Liu, Noah F Greenwald, Alex Kong, Erin F McCaffrey, Ke Xuan Leow, Dunja Mrdjen, Bryan J Cannon, Josef Lorenz Rumberger, Sricharan Reddy Varra, R Michael Angelo
Robust phenotyping of highly multiplexed tissue imaging data using pixel-level clustering. Nature communications 14 (1) (2023)
Philipp J Rauch, Jayakrishnan Gopakumar, Alexander James Silver, Daniel Nachun, Herra Ahmad, Marie McConkey, Tetsushi Nakao, Marc Bosse, Thiago Rentz, Nora Vivanco Gonzalez, Noah F Greenwald, Erin F McCaffrey, Zumana Khair, Manu Gopakumar, Kameron B Rodrigues, Amy E Lin, Eti Sinha, Maia Fefer, Drew N Cohen, Amélie Vromman, Eugenia Shvartz, Galina Sukhova, Sean Bendall, R Michael Angelo, Peter Libby, Benjamin L Ebert, Siddhartha Jaiswal
Loss-of-function mutations in Dnmt3a and Tet2 lead to accelerated atherosclerosis and concordant macrophage phenotypes. Nature cardiovascular research 2 (9) (2023)
Yunhao Bai, Bokai Zhu, John-Paul Oliveria, Bryan J Cannon, Dorien Feyaerts, Marc Bosse, Kausalia Vijayaragavan, Noah F Greenwald, Darci J Phillips, Christian M Schürch, Samuel M Naik, Edward A Ganio, Brice L Gaudilliere, Scott J Rodig, Michael B Miller, R Michael Angelo, Sean C Bendall, Xavier Rovira-Clavé, Garry P Nolan, Sizun J Jiang
Expanded vacuum-stable gels for multiplexed high-resolution spatial histopathology. Nature communications 14 (1) (2023)
Erin F McCaffrey, Michele Donato, Leeat Keren, Zhenghao Chen, Alea Delmastro, Megan Burke Fitzpatrick, Sanjana Gupta, Noah F Greenwald, Alex Baranski, William Graf, Rashmi Kumar, Marc Bosse, Christine Camacho Fullaway, Pratista K Ramdial, Erna Forgó, Vladimir Jojic, David Van Valen, Smriti Mehra, Shabaana Abdul Khader, Sean C Bendall, Matt van de Rijn, Daniel Kalman, Deepak Kaushal, Robert L Hunter, Niaz Banaei, Adrie J C Steyn, Purvesh Khatri, R Michael Angelo
The immunoregulatory landscape of human tuberculosis granulomas. Nature immunology 23 (2) (2022)
Frank P B Dubios, Ofer Shapira, Noah F Greenwald, Travis Zack, Jeremiah Wala, Jessica W Tsai, Alexander Crane, Audrey Baguette, Djihad Hadjadj, Ashot S Harutyunyan, Kiran H Kumar, Mirjam Blattner-Johnson, Jayne Vogelzang, Cecilia Sousa, Kyung Shin Kang, Claire Sinai, Dayle K Wang, Prasidda Khadka, Kathleen Lewis, Lan Nguyen, Hayley Malkin, Patricia Ho, Ryan O'Rourke, Shu Zhang, Rose Gold, Davy Deng, Jonathan Serrano, Matija Snuderl, Chris Jones, Karen D Wright, Susan N Chi, Jacques Grill, Claudia L Kleinman, Liliana Christova Goumnerova, Nada Jabado, David T W Jones, Mark W Kieran, Keith L Ligon, Rameen Beroukhim, Pratiti Bandopadhayay
Structural variants shape driver combinations and outcomes in pediatric high-grade glioma. Nature cancer 3 (8) (2022)
Noah F Greenwald, Geneva Miller, Erick Moen, Alex Kong, Adam Kagel, Thomas Dougherty, Christine Camacho Fullaway, Brianna J McIntosh, Ke Xuan Leow, Morgan Sarah Schwartz, Cole Pavelchek, Sunny Cui, Isabella Camplisson, Omer Bar-Tal, Jaiveer Singh, Mara Fong, Gautam Chaudhry, Zion Abraham, Jackson Moseley, Shiri Warshawsky, Erin Soon, Shirley Greenbaum, Tyler Risom, Travis J Hollman, Sean C Bendall, Leeat Keren, William Graf, R Michael Angelo, David Van Valen
Whole-cell segmentation of tissue images with human-level performance using large-scale data annotation and deep learning. Nature biotechnology (2021)
Dylan Bannon, Erick Moen, Morgan S Schwartz, Enrico Borba, Takamasa Kudo, Noah F Greenwald, Vibha Vijayakumar, Brian Chang, Edward Pao, Erik Osterman, William Graf, David Van Valen
DeepCell Kiosk: scaling deep learning-enabled cellular image analysis with Kubernetes. Nature methods 18 (1) (2021)
Camilo Jaimes, Sridhar Vajapeyam, D Brown, Pei-Chi Kao, Clement Ma, L Greenspan, Nalin Gupta, Liliana Christova Goumnerova, Pratiti Bandopadhayay, Frank P B Dubios, Noah F Greenwald, Travis Zack, O Shapira, Rameen Beroukhim, Keith L Ligon, Susan N Chi, Mark W Kieran, Karen D Wright, T Young Poussaint
MR Imaging Correlates for Molecular and Mutational Analyses in Children with Diffuse Intrinsic Pontine Glioma. AJNR. American journal of neuroradiology 41 (5) (2020)
Felix J Hartmann, Dunja Mrdjen, Erin McCaffrey, David R Glass, Noah F Greenwald, Anusha Bharadwaj, Zumana Khair, Sanne G S Verberk, Alex Baranski, Reema Baskar, William Graf, David Van Valen, Jan Van den Bossche, Michael Angelo, Sean C Bendall
Single-cell metabolic profiling of human cytotoxic T cells. Nature biotechnology 39 (2) (2020)
Pratiti Bandopadhayay, Frederica Piccioni, Ryan O'Rourke, Patricia Ho, Elizabeth M Gonzalez, Graham Buchan, Kenin Qian, Gabrielle Gionet, Emily Girard, Margo Coxon, Matthew G Rees, Lisa Brenan, Frank Dubois, Ofer Shapira, Noah F Greenwald, Melanie Pages, Amanda Balboni Iniguez, Brenton R Paolella, Alice Meng, Claire Sinai, Giovanni Roti, Neekesh V Dharia, Amanda Creech, Benjamin Tanenbaum, Prasidda Khadka, Adam Tracy, Hong L Tiv, Andrew L Hong, Shannon Coy, Rumana Rashid, Jia-Ren Lin, Glenn S Cowley, Fred C Lam, Amy Goodale, Yenarae Lee, Kathleen Schoolcraft, Francisca Vazquez, William C Hahn, Aviad Tsherniak, James E Bradner, Michael B Yaffe, Till Milde, Stefan M Pfister, Jun Qi, Monica Schenone, Steven A Carr, Keith L Ligon, Mark W Kieran, Sandro Santagata, James M Olson, Prafulla C Gokhale, Jacob D Jaffe, David E Root, Kimberly Stegmaier, Cory M Johannessen, Rameen Beroukhim
Neuronal differentiation and cell-cycle programs mediate response to BET-bromodomain inhibition in MYC-driven medulloblastoma. Nature communications 10 (1) (2019)
Leeat Keren, Marc Bosse, Steve Thompson, Tyler Risom, Kausalia Vijayaragavan, Erin F McCaffrey, Diana M Marquez, Roshan Angoshtari, Noah F Greenwald, Harris Fienberg, Jennifer Wang, Neeraja Kambham, David Kirkwood, Garry P Nolan, Thomas J Montine, Stephen J Galli, Robert B West, Sean C Bendall, R Michael Angelo
MIBI-TOF: A multiplexed imaging platform relates cellular phenotypes and tissue structure. Science advances 5 (10) (2019)
Jeremiah A Wala, Pratiti Bandopadhayay, Noah F Greenwald, Ryan O'Rourke, Ted Sharpe, Chip Stewart, Steven E Schumacher, Yilong Li, Joachim Weischenfeldt, Xiaotong Yao, Chad Nusbaum, Peter Campbell, Gad A Getz, Matthew L Meyerson, Cheng-Zhong Zhang, Marcin Imielinski, Rameen Beroukhim
SvABA: genome-wide detection of structural variants and indels by local assembly. Genome research 28 (4) (2018)
Wenya Linda Bi, Noah F Greenwald, Malak Abedalthagafi, Jeremiah A Wala, Will J Gibson, Pankaj K Agarwalla, Peleg Horowitz, Steven E Schumacher, Ekaterina Esaulova, Yu Mei, Aaron Chevalier, Matthew A Ducar, Aaron R Thorner, Paul van Hummelen, Anat O Stemmer-Rachamimov, Maksym Artyomov, Ossama Al-Mefty, Gavin P Dunn, Sandro Santagata, Ian F Dunn, Rameen Beroukhim
Erratum: Genomic landscape of high-grade meningiomas. NPJ genomic medicine 2 (2017)
Uri Ben-David, Gavin Ha, Yuen-Yi Tseng, Noah F Greenwald, Coyin Oh, Juliann Shih, James M McFarland, Bang Wong, Jesse S Boehm, Rameen Beroukhim, Todd R Golub
Patient-derived xenografts undergo mouse-specific tumor evolution. Nature genetics 49 (11) (2017)

Noah F Greenwald.css-eqlu8i{font-size:small;padding-left:4px;} (N F Greenwald, Noah Greenwald)

Publication Activity (10 Years)

Top Topics

Top Venues

Noah F Greenwald (N F Greenwald, Noah Greenwald)