Mathieu Lupien

Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2016-2024
Publications (10 Years): 26

Top Topics

Transcription Factor

Radical Prostatectomy

Genome Wide Association Study

Top Venues

Nature communications

Nature genetics

Genome research

This page only lists publications with an associated author ORCID identifier.

Publications

Raunak Shrestha, Lisa N Chesner, Meng Zhang, Stanley Zhou, Adam Foye, Arian Lundberg, Alana S Weinstein, Martin Sjostrom, Xiaolin Zhu, Thaidy Moreno-Rodriguez, Haolong Li, Su C/Pcf West Coast Prostate Cancer Dream Team, Joshi J Alumkal, Rahul R Aggarwal, Eric J Small, Mathieu Lupien, David A Quigley, Felix Y Feng
An Atlas of Accessible Chromatin in Advanced Prostate Cancer Reveals the Epigenetic Evolution during Tumor Progression. Cancer research (2024)
Mehran Karimzadeh, Christopher Arlidge, Ariana Rostami, Mathieu Lupien, Scott V Bratman, Michael M Hoffman
Human papillomavirus integration transforms chromatin to drive oncogenesis. Genome biology 24 (1) (2023)
Mehran Karimzadeh, Christopher Arlidge, Ariana Rostami, Mathieu Lupien, Scott V Bratman, Michael M Hoffman
Human papillomavirus integration transforms chromatin to drive oncogenesis. Genome biology 24 (1) (2023)
Mehran Karimzadeh, Christopher Arlidge, Ariana Rostami, Mathieu Lupien, Scott V Bratman, Michael M Hoffman
Human papillomavirus integration transforms chromatin to drive oncogenesis. Genome biology 24 (1) (2023)
Mehran Karimzadeh, Christopher Arlidge, Ariana Rostami, Mathieu Lupien, Scott V Bratman, Michael M Hoffman
Human papillomavirus integration transforms chromatin to drive oncogenesis. Genome biology 24 (1) (2023)
Giacomo Grillo, Tina Keshavarzian, Simon Linder, Christopher Arlidge, Lisanne Mout, Ankita Nand, Mona Teng, Aditi Qamra, Stanley Zhou, Ken J Kron, Alex Murison, James R Hawley, Michael Fraser, Theodorus H Van der Kwast, Ganesh V Raj, Housheng Hansen He, Wilbert Zwart, Mathieu Lupien
Transposable elements are co-opted as oncogenic regulatory elements by lineage-specific transcription factors in prostate cancer. Cancer discovery (2023)
Sarina Cameron, Genevieve Deblois, James R Hawley, Aditi Qamra, Stanley Zhou, Seyed Ali Madani Tonekaboni, Alexander Murison, Romy Van Vliet, Juan Liu, Jason W Locasale, Mathieu Lupien
Chronic hypoxia favours adoption to a castration-resistant cell state in prostate cancer. Oncogene (2023)
Qin Wu, David Y Nie, Wail Ba-Alawi, YiShuai Ji, ZiWen Zhang, Jennifer Cruickshank, Jillian Haight, Felipe E Ciamponi, Jocelyn Chen, Shili Duan, Yudao Shen, Jing Liu, Sajid A Marhon, Parinaz Mehdipour, Magdalena M Szewczyk, Nergiz Dogan-Artun, WenJun Chen, Lan Xin Zhang, Genevieve Deblois, Panagiotis Prinos, Katlin B Massirer, Dalia Barsyte-Lovejoy, Jian Jin, Daniel D De Carvalho, Benjamin Haibe-Kains, XiaoJia Wang, David W Cescon, Mathieu Lupien, Cheryl H Arrowsmith
PRMT inhibition induces a viral mimicry response in triple-negative breast cancer. Nature chemical biology 18 (8) (2022)
Connor Yanchus, Kristen L Drucker, Thomas M Kollmeyer, Ricky Tsai, Warren Winick-Ng, Minggao Liang, Ahmad Malik, Judy Pawling, Silvana B De Lorenzo, Asma Ali, Paul A Decker, Matt L Kosel, Arijit Panda, Khalid N Al-Zahrani, Lingyan Jiang, Jared W L Browning, Chris Lowden, Michael Geuenich, J Javier Hernandez, Jessica T Gosio, Musaddeque Ahmed, Sampath Kumar Loganathan, Jacob Berman, Daniel Trcka, Kulandaimanuvel Antony Michealraj, Jerome Fortin, Brittany Carson, Ethan W Hollingsworth, Sandra Jacinto, Parisa Mazrooei, Lily Zhou, Andrew J Elia, Mathieu Lupien, Housheng Hansen He, Daniel J Murphy, Liguo Wang, Alexej Abyzov, James W Dennis, Philipp G Maass, Kieran Campbell, Michael D Wilson, Daniel H Lachance, Margaret Wrensch, John Wiencke, Tak Wah Mak, Len A Pennacchio, Diane E Dickel, Axel Visel, Jeffrey L Wrana, Michael D Taylor, Gelareh Zadeh, Peter B Dirks, Jeanette E Eckel-Passow, Liliana Attisano, Ana Pombo, Cristiane M Ida, Evgeny Z Kvon, Robert B Jenkins, Daniel Schramek
A noncoding single-nucleotide polymorphism at 8q24 drives IDH1 -mutant glioma formation. Science (New York, N.Y.) 378 (6615) (2022)
Patty Sachamitr, Jolene Caifeng Ho, Felipe E Ciamponi, Wail Ba-Alawi, Fiona J Coutinho, Paul Guilhamon, Michelle M Kushida, Florence M G Cavalli, Lilian Lee, Naghmeh Rastegar, Victoria Vu, Maria Sánchez-Osuna, Jasmin Coulombe-Huntington, Evgeny Kanshin, Heather Whetstone, Mathieu Durand, Philippe Thibault, Kirsten Hart, Maria Mangos, Joseph Veyhl, Wenjun Chen, Nhat Tran, Bang-Chi Duong, Ahmed M Aman, Xinghui Che, Xiaoyang Lan, Owen Whitley, Olga Zaslaver, Dalia Barsyte-Lovejoy, Laura M Richards, Ian J Restall, Amy A Caudy, Hannes L Röst, Zahid Quyoom Bonday, Mark Bernstein, Sunit Das, Michael D Cusimano, Julian Spears, Gary D Baider, Trevor J Pugh, Mike Tyers, Mathieu Lupien, Benjamin Haibe-Kains, H Artee Luchman, Samuel Weiss, Katlin B Massirer, Panagiotis Prinos, Cheryl H Arrowsmith, Peter B Dirks
PRMT5 inhibition disrupts splicing and stemness in glioblastoma. Nature communications 12 (1) (2021)
Lindsay M Payer, Jared P Steranka, Maria S Kryatova, Giacomo Grillo, Mathieu Lupien, Pedro P Rocha, Kathleen H Burns
Alu insertion variants alter gene transcript levels. Genome research (2021)
Seyed Ali Madani Tonekaboni, Benjamin Haibe-Kains, Mathieu Lupien
Large organized chromatin lysine domains help distinguish primitive from differentiated cell populations. Nature communications 12 (1) (2021)
Ana Nikolic, Divya Singhal, Katrina Ellestad, Michael J Johnston, Yaoqing Shen, Aaron Gillmor, Sorana Morrissy, J Gregory Cairncross, Steven J M Jones, Mathieu Lupien, Jennifer A Chan, Paola Neri, Nizar Bahlis, Marco Gallo
Copy-scAT: Deconvoluting single-cell chromatin accessibility of genetic subclones in cancer. Science advances 7 (42) (2021)
Paul Guilhamon, Charles Chesnelong, Michelle M Kushida, Ana Nikolic, Divya Singhal, Graham MacLeod, Seyed Ali Madani Tonekaboni, Florence Mg Cavalli, Christopher Arlidge, Nishani Rajakulendran, Naghmeh Rastegar, Xiaoguang Hao, Rozina Hassam, Laura J Smith, Heather Whetstone, Fiona J Coutinho, Bettina Nadorp, Katrina I Ellestad, H Artee Luchman, Jennifer Ai-Wen Chan, Molly S Shoichet, Michael D Taylor, Benjamin Haibe-Kains, Samuel Weiss, Stephane Angers, Marco Gallo, Peter B Dirks, Mathieu Lupien
Single-cell chromatin accessibility profiling of glioblastoma identifies an invasive cancer stem cell population associated with lower survival. eLife 10 (2021)
Stanley Zhou, James R Hawley, Fraser Soares, Giacomo Grillo, Mona Teng, Seyed Ali Madani Tonekaboni, Junjie Tony Hua, Ken J Kron, Parisa Mazrooei, Musaddeque Ahmed, Christopher Arlidge, Hwa Young Yun, Julie Livingstone, Vincent Huang, Takafumi N Yamaguchi, Shadrielle M G Espiritu, Yanyun Zhu, Tesa M Severson, Alex Murison, Sarina Cameron, Wilbert Zwart, Theodorus H Van der Kwast, Trevor J Pugh, Michael Fraser, Paul C Boutros, Robert G Bristow, Housheng Hansen He, Mathieu Lupien
Noncoding mutations target cis-regulatory elements of the FOXA1 plexus in prostate cancer. Nature communications 11 (1) (2020)
Mélanie Criqui, Aditi Qamra, Tsz Wai Chu, Monika Sharma, Julissa Tsao, Danielle A Henry, Dalia Barsyte-Lovejoy, Cheryl H Arrowsmith, Neil Winegarden, Mathieu Lupien, Lea Harrington
Telomere dysfunction cooperates with epigenetic alterations to impair murine embryonic stem cell fate commitment. eLife 9 (2020)
Qin Wu, Wail Ba-Alawi, Genevieve Deblois, Jennifer Cruickshank, Shili Duan, Evelyne Lima-Fernandes, Jillian Haight, Seyed Ali Madani Tonekaboni, Anne-Marie N Fortier, Hellen Kuasne, Trevor D McKee, Hassan Mahmoud, Michelle Kushida, Sarina Cameron, Nergiz Dogan-Artun, WenJun Chen, Yan Nie, Lan Xin Zhang, Ravi N Vellanki, Stanley Zhou, Panagiotis Prinos, Bradly G Wouters, Peter B Dirks, Susan J Done, Morag Park, David W Cescon, Benjamin Haibe-Kains, Mathieu Lupien, Cheryl H Arrowsmith
GLUT1 inhibition blocks growth of RB1-positive triple negative breast cancer. Nature communications 11 (1) (2020)
Geneviève Deblois, Seyed Ali Madani Tonekaboni, Giacomo Grillo, Constanza Martinez, Yunchi Ingrid Kao, Felicia Tai, Ilias Ettayebi, Anne-Marie Fortier, Paul Savage, Alexandra N Fedor, Xiaojing Liu, Paul Guilhamon, Evelyne Lima-Fernandes, Alex Murison, Hellen Kuasne, Wail Ba-Alawi, David W Cescon, Cheryl H Arrowsmith, Daniel D De Carvalho, Benjamin Haibe-Kains, Jason W Locasale, Morag Park, Mathieu Lupien
Epigenetic Switch-Induced Viral Mimicry Evasion in Chemotherapy-Resistant Breast Cancer. Cancer discovery 10 (9) (2020)
Mona Teng, Stanley Zhou, Changmeng Cai, Mathieu Lupien, Housheng Hansen He
Pioneer of prostate cancer: past, present and the future of FOXA1. Protein & cell 12 (1) (2020)
Seyed Ali Madani Tonekaboni, Parisa Mazrooei, Victor Kofia, Benjamin Haibe-Kains, Mathieu Lupien
Identifying clusters of cis-regulatory elements underpinning TAD structures and lineage-specific regulatory networks. Genome research 29 (10) (2019)
Qin Wu, David Heidenreich, Stanley Zhou, Suzanne Ackloo, Andreas Krämer, Kiran Nakka, Evelyne Lima-Fernandes, Genevieve Deblois, Shili Duan, Ravi N Vellanki, Fengling Li, Masoud Vedadi, F Jeffrey Dilworth, Mathieu Lupien, Paul E Brennan, Cheryl H Arrowsmith, Susanne Müller, Oleg Fedorov, Panagis Filippakopoulos, Stefan Knapp
A chemical toolbox for the study of bromodomains and epigenetic signaling. Nature communications 10 (1) (2019)
Evelyne Lima-Fernandes, Alex Murison, Tiago da Silva Medina, Yadong Wang, Anqi Ma, Cherry Leung, Genna M Luciani, Jennifer Haynes, Aaron Pollett, Constanze Zeller, Shili Duan, Antonija Kreso, Dalia Barsyte-Lovejoy, Bradly G Wouters, Jian Jin, Daniel D De Carvalho, Mathieu Lupien, Cheryl H Arrowsmith, Catherine A O'Brien
Targeting bivalency de-represses Indian Hedgehog and inhibits self-renewal of colorectal cancer-initiating cells. Nature communications 10 (1) (2019)
Paul Guilhamon, Mathieu Lupien
SMuRF: a novel tool to identify regulatory elements enriched for somatic point mutations. BMC bioinformatics 19 (1) (2018)
Ken J Kron, Alexander Murison, Stanley Zhou, Vincent Huang, Takafumi N Yamaguchi, Yu-Jia Shiah, Michael Fraser, Theodorus van der Kwast, Paul C Boutros, Robert G Bristow, Mathieu Lupien
TMPRSS2-ERG fusion co-opts master transcription factors and activates NOTCH signaling in primary prostate cancer. Nature genetics 49 (9) (2017)
Haiyang Guo, Musaddeque Ahmed, Fan Zhang, Cindy Q Yao, SiDe Li, Yi Liang, Junjie Hua, Fraser Soares, Yifei Sun, Jens Langstein, Yuchen Li, Christine Poon, Swneke D Bailey, Kinjal Desai, Teng Fei, Qiyuan Li, Dorota H Sendorek, Michael Fraser, John R Prensner, Trevor J Pugh, Mark Pomerantz, Robert G Bristow, Mathieu Lupien, Felix Y Feng, Paul C Boutros, Matthew L Freedman, Martin J Walsh, Housheng Hansen He
Modulation of long noncoding RNAs by risk SNPs underlying genetic predispositions to prostate cancer. Nature genetics 48 (10) (2016)
Swneke D Bailey, Kinjal Desai, Ken J Kron, Parisa Mazrooei, Nicholas A Sinnott-Armstrong, Aislinn E Treloar, Mark Dowar, Kelsie L Thu, David W Cescon, Jennifer Silvester, S Y Cindy Yang, Xue Wu, Rossanna C Pezo, Benjamin Haibe-Kains, Tak W Mak, Philippe L Bedard, Trevor J Pugh, Richard C Sallari, Mathieu Lupien
Noncoding somatic and inherited single-nucleotide variants converge to promote ESR1 expression in breast cancer. Nature genetics 48 (10) (2016)